DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prx-6 and Pex6

DIOPT Version :9

Sequence 1:NP_504268.1 Gene:prx-6 / 266912 WormBaseID:WBGene00004195 Length:720 Species:Caenorhabditis elegans
Sequence 2:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster


Alignment Length:814 Identity:231/814 - (28%)
Similarity:379/814 - (46%) Gaps:153/814 - (18%)


- Green bases have known domain annotations that are detailed below.


 Worm    27 LLWNEEVELKIVVDQSGASINTLSIHPVTCWSLGILDSQLVKTSFTITTDHGK-SSNIERVMKVQ 90
            |:.||:::.:.:|..|.......:..|...:...::..:.|:....:.:|.|. :..:.:.|..:
  Fly    93 LIKNEQIKSEHLVFASQEVYENYAESPDVNFVNLVIRGRRVRIGKPLASDEGNMTQTVIKQMLQE 157

 Worm    91 TSTSVKIGSLRISRCDVFNLFGPDLVKNVAVDNITPNFKFH------------ETPIP-ISEDAK 142
            ...::....|..::|....|:    |:.....||...|:..            |..|| |:..|.
  Fly   158 APHTIVAQILPAAQCQPNCLY----VQENFYGNILDRFQIRSNCWVQVEHFADEQTIPGIATKAH 218

 Worm   143 LSLMRQPSVAKNIRLEKHHLKQILKSANVFYKNDVIRITNYNAYTDKTTHL--FYKLDVSSS--- 202
            :.|:..|          |.|...|        .:||....:|  |.:..|.  .|:::|::.   
  Fly   219 VYLVADP----------HELPAEL--------TEVILSNYFN--TPRLMHRGHTYRIEVNAELVG 263

 Worm   203 -------------------PCI-MDSSTAVYETSAVSQ-------SLPFSNFLLKNSLTSSM--- 237
                               .|| :::..:.:|..|:..       .:|.|:..|...:..||   
  Fly   264 TATYAHYYLIFAHLRHVHLKCIHLETKGSEFELQAIVAKNFSNLVQVPASHSFLPRQVLDSMAIV 328

 Worm   238 --------------RTTVFRMTQIYSAQKTISKKAL--VLLVTGASGSGKRLMSRVFASETHRNF 286
                          |::|.......||  .:|.|.:  |.|:.|..||||..:....|.|...:.
  Fly   329 ENYPSGLRKPYKLLRSSVDAFLPKKSA--CLSSKHIFPVFLLQGERGSGKSKLVSAVAQELGMHI 391

 Worm   287 FEVDGYEMVCENASTSEAKWTSWWEKAKLLQNCVLFIRNSNVLAIDQFNALDRRILQ----YMEQ 347
            :..|..|:|.:..|.:|.|..:.:.|:::.:..::...|..:..||.....|.|:|.    .:::
  Fly   392 YGADCAEIVSQVPSHTEMKLKAVFAKSQVCEPLMICFHNFEIFGIDNEGNEDLRLLSAFHVQVQE 456

 Worm   348 KLSEPSKITVIFSCNTDTMSSMPANVKNLALYTFSAEFMDEND----------RKTWLQYYLNEK 402
            ..:...|..::....|......|. ::.|.|...:.:...:.:          |:|:.....|:|
  Fly   457 LFNRDRKHPIVVVALTSDRHLKPM-IQGLFLEIINIDMPSKEERFEILRWMHVRETFNDIIYNQK 520

 Worm   403 -----------------------------LANHVAKKTSGFTLAELEKLVKNGKKVKIEEKEEKV 438
                                         :...||.|:.||.|.:|:.|..|..::||..:..:.
  Fly   521 AIEQLPLFSRENQSQFMPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRT 585

 Worm   439 YEDL------IDKRNSNFADAIGAPKIPNVRWEDVGGLEETKQTVLESI-----RTNLFGSRALK 492
            ..|:      :....|:|||::||||:|.|.|.|:|||.:.|..:..||     ..:|.| :.|:
  Fly   586 TLDMSHFAKNLTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLKHVHLMG-KNLR 649

 Worm   493 RSGIILYGSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIF 557
            ||||:|||.||.||||:|||||||..::||||:||||||.||||||:|:|:||.||:.|:|||:|
  Fly   650 RSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLF 714

 Worm   558 FDEIDSLAPNRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTK-VFVMGATNRPDLLDNSLMTPGR 621
            .||:||||||||..||||||:||:|||||||:|.:.:...:| :|::.|||||||:|.:|:.|||
  Fly   715 LDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLRPGR 779

 Worm   622 FDKLVEVKPGEDVESKTKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQLFSIISNAGMAAIVE 686
            ||||..|.|....|.|..:|.|.:::...:..||:.:||.::..:||||.|:||.|||.::|:..
  Fly   780 FDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRR 844

 Worm   687 TIQ-----SIEDGKTENQSIRVAQRHLLESVKRF 715
            ||.     :|.:.:...:::.|.:....:|..:|
  Fly   845 TIDGHLSGTISEKELVPENVIVQEEDFTKSFNKF 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prx-6NP_504268.1 CDC48 <261..714 CDD:273521 180/512 (35%)
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 176/481 (37%)
P-loop_NTPase 367..492 CDD:304359 26/125 (21%)
AAA 653..787 CDD:278434 88/133 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164770
Domainoid 1 1.000 185 1.000 Domainoid score I2020
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 295 1.000 Inparanoid score I1669
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D233419at2759
OrthoFinder 1 1.000 - - FOG0004626
OrthoInspector 1 1.000 - - oto19528
orthoMCL 1 0.900 - - OOG6_103617
Panther 1 1.100 - - LDO PTHR23077
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R903
SonicParanoid 1 1.000 - - X3235
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.930

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