DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo-1 and Sumo

DIOPT Version :10

Sequence 1:NP_490842.1 Gene:smo-1 / 266820 WormBaseID:WBGene00004888 Length:91 Species:Caenorhabditis elegans
Sequence 2:NP_477411.1 Gene:Sumo / 33981 FlyBaseID:FBgn0264922 Length:90 Species:Drosophila melanogaster


Alignment Length:90 Identity:43/90 - (47%)
Similarity:64/90 - (71%) Gaps:2/90 - (2%)


- Green bases have known domain annotations that are detailed below.


 Worm     1 MADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRIN 65
            |:|:  :.|...|:|.:||:|||:..|.|::|..|.:.||..:|.||.|:::..:||.|||:.||
  Fly     1 MSDE--KKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPIN 63

 Worm    66 DDDTPKTLEMEDDDVIEVYQEQLGG 90
            ::|||.:||||:.|.|||||:|.||
  Fly    64 ENDTPTSLEMEEGDTIEVYQQQTGG 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smo-1NP_490842.1 Ubl_SUMO1 14..89 CDD:340531 37/74 (50%)
SumoNP_477411.1 Ubl_SUMO2_3_4 12..83 CDD:340532 34/70 (49%)

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