DRSC/TRiP Functional Genomics Resources

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Protein Alignment MDGA1 and ketn-1

DIOPT Version :9

Sequence 1:XP_006715119.1 Gene:MDGA1 / 266727 HGNCID:19267 Length:973 Species:Homo sapiens
Sequence 2:NP_001294668.1 Gene:ketn-1 / 178740 WormBaseID:WBGene00004130 Length:4963 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MDGA1XP_006715119.1 IG_like 46..126 CDD:214653
IGc2 52..115 CDD:197706
IG_like 152..217 CDD:214653
Ig 153..217 CDD:143165
IG_like 248..326 CDD:214653
IGc2 254..315 CDD:197706
IGc2 350..418 CDD:197706
IG_like 450..535 CDD:214653
IGc2 455..515 CDD:197706
Ig 541..622 CDD:299845
IG_like 543..631 CDD:214653
MAM 753..917 CDD:279023
MAM 753..916 CDD:99706
ketn-1NP_001294668.1 I-set 3720..3806 CDD:254352
Ig 3740..3806 CDD:143165
I-set 3821..3914 CDD:254352
Ig 3822..3914 CDD:299845
I-set 3962..4052 CDD:254352
Ig 3989..4050 CDD:143165
I-set 4098..4184 CDD:254352
Ig 4105..4184 CDD:299845
I-set 4546..4635 CDD:254352
Ig 4567..4635 CDD:299845
I-set 4645..4734 CDD:254352
Ig 4662..4734 CDD:299845
I-set 4752..4839 CDD:254352
Ig 4769..4838 CDD:143165
I-set 4872..4960 CDD:254352
Ig 4875..4960 CDD:299845
I-set 18..106 CDD:254352
Ig 21..101 CDD:299845
I-set 136..224 CDD:254352
Ig 153..218 CDD:299845
I-set 303..393 CDD:254352
Ig 305..387 CDD:299845
Ig 705..795 CDD:299845
I-set 706..797 CDD:254352
I-set 806..894 CDD:254352
IGc2 820..884 CDD:197706
I-set 937..1028 CDD:254352
Ig 965..1025 CDD:143165
I-set 1065..1156 CDD:254352
Ig 1092..1153 CDD:143165
I-set 1190..1281 CDD:254352
Ig 1218..1279 CDD:143165
I-set 1328..1420 CDD:254352
Ig 1361..1416 CDD:299845
I-set 1462..1554 CDD:254352
Ig 1463..1543 CDD:299845
I-set 1595..1685 CDD:254352
Ig 1616..1685 CDD:143165
I-set 1728..1816 CDD:254352
Ig 1755..1816 CDD:143165
IG_like 1872..1953 CDD:214653
Ig 1872..1948 CDD:299845
I-set 1993..2085 CDD:254352
IGc2 2008..2076 CDD:197706
I-set 2126..2217 CDD:254352
IGc2 2140..2208 CDD:197706
I-set 2258..2351 CDD:254352
Ig 2286..2348 CDD:143165
DUF1136 2357..2382 CDD:284093
I-set 2391..2482 CDD:254352
IGc2 2413..2472 CDD:197706
DUF1136 2488..2514 CDD:284093
Ig 2521..2615 CDD:299845
I-set 2522..2612 CDD:254352
DUF1136 2620..2645 CDD:284093
I-set 2654..2746 CDD:254352
Ig 2682..2743 CDD:143165
DUF1136 2752..2776 CDD:284093
IG_like 2799..2878 CDD:214653
Ig 2805..2876 CDD:143165
DUF1136 2885..>2905 CDD:284093
I-set 2919..3011 CDD:254352
Ig 2949..3011 CDD:299845
I-set 3051..3141 CDD:254352
Ig 3078..3139 CDD:143165
I-set 3182..3274 CDD:254352
Ig 3204..3270 CDD:299845
IG 3327..3406 CDD:214652
Ig 3343..3403 CDD:143165
I-set 3448..3539 CDD:254352
Ig 3476..3537 CDD:143165
I-set 3584..3676 CDD:254352
Ig 3602..3673 CDD:143165
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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