DRSC/TRiP Functional Genomics Resources

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Protein Alignment MDGA1 and ptp-3

DIOPT Version :9

Sequence 1:XP_006715119.1 Gene:MDGA1 / 266727 HGNCID:19267 Length:973 Species:Homo sapiens
Sequence 2:NP_001263671.1 Gene:ptp-3 / 174685 WormBaseID:WBGene00004215 Length:2248 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MDGA1XP_006715119.1 IG_like 46..126 CDD:214653
IGc2 52..115 CDD:197706
IG_like 152..217 CDD:214653
Ig 153..217 CDD:143165
IG_like 248..326 CDD:214653
IGc2 254..315 CDD:197706
IGc2 350..418 CDD:197706
IG_like 450..535 CDD:214653
IGc2 455..515 CDD:197706
Ig 541..622 CDD:299845
IG_like 543..631 CDD:214653
MAM 753..917 CDD:279023
MAM 753..916 CDD:99706
ptp-3NP_001263671.1 I-set 93..184 CDD:254352
Ig 106..185 CDD:299845
IG_like 201..287 CDD:214653
Ig 212..288 CDD:299845
IG_like 302..378 CDD:214653
Ig 309..377 CDD:299845
FN3 383..499 CDD:238020
FN3 507..600 CDD:238020
FN3 605..693 CDD:238020
FN3 700..813 CDD:238020
FN3 818..918 CDD:238020
FN3 923..1020 CDD:238020
FN3 1027..1116 CDD:238020
fn3 1125..1213 CDD:278470
PTPc 1694..1949 CDD:214550
PTPc 1720..1949 CDD:238006
PTPc 1980..2239 CDD:214550
PTPc 2008..2239 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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