DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a8 and Cyp6a16

DIOPT Version :9

Sequence 1:XP_038965258.1 Gene:Cyp4a8 / 266674 RGDID:628846 Length:510 Species:Rattus norvegicus
Sequence 2:NP_001285631.1 Gene:Cyp6a16 / 19836250 FlyBaseID:FBgn0031726 Length:500 Species:Drosophila melanogaster


Alignment Length:520 Identity:151/520 - (29%)
Similarity:243/520 - (46%) Gaps:65/520 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat    28 LLLLFKTAQF---YLHRR---WLLRATQQFPSPPSHWFFGH-------KLSFLVDQEFQDILTRV 79
            ||||.....|   ||..|   |.||.   .|....|:.|||       ..|.|:.:.:.......
  Fly     5 LLLLTSLLSFLLGYLRYRFTYWELRG---IPQLRPHFLFGHFFRLQSVHYSELLQETYDAFRGSA 66

  Rat    80 KNFPSACPQWLWGSNVRIQ----VYDPDYMKLILGRS-----DPKSHHSYRFLAPWIGYGLLLLN 135
            |         :.|:.|.::    |.|.|.:|.:|.|.     |.:|.|.....|     .|..|.
  Fly    67 K---------VAGTYVFLRPMAVVLDLDLVKAVLIRDFNNFVDRRSFHGDPLTA-----NLFNLQ 117

  Rat   136 GQTWFQHRRMLTPAFHYDTLKPYVGIMADSVRIMLDKWEQIVG-QDSTLEIFQHITLMTLDTIMK 199
            |:.|...|..|:|.|....:|...|.::...:.:...::::|| |.:.||:...:...|.|.|..
  Fly   118 GEEWRNLRTKLSPTFTSGKMKYMFGTVSTVAQQLGGTFDELVGSQGAVLELHDLMARYTTDVIGS 182

  Rat   200 CAFSQEGSV--QLDRKYKSYIKAVEDLNNLSFFRIRNIFHQNDIIYSLSSNGRKARSAWQLAHEH 262
            |||..|.|.  :...:::...:.:...:|.|   ||....:...:.||:..|...|..      |
  Fly   183 CAFGTECSSLREPQAEFRQVGRRIFRNSNRS---IRWRIFKMTYLSSLAKLGLPVRIL------H 238

  Rat   263 TDQVIKSRKAQLQDEEELQKVKQKRRLDFLDILL-FARIENGSSLSDKDLRAEVDTFMFEGHDTT 326
            .| :.|.....:::..||::.:..||.||:|:|| ..|.|||..|:.:.:.|:...|...|.:|:
  Fly   239 PD-ITKFFNRIVRETVELRERENIRRNDFMDLLLDLRRQENGKGLTMEQMAAQAFVFFVAGFETS 302

  Rat   327 ASGISWIFYALATNPEHQQGCRKEIQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPVTAVSR 391
            :|.:|:..:.||.|.:.||..|.||...:|....:|::.:.:|||....|.|.||.||.:::::|
  Fly   303 SSNMSYALFELAKNQDVQQKLRMEINDSIGKHGKLTYEAMMEMPYLDQTITETLRKYPALSSLTR 367

  Rat   392 MLST--PVTFPDGRS---LPKGITVMLSFYGLHHNPTVWPNPEVFDPYRFAPESSRHSH--SFLP 449
            :.|.  .:..|||..   |.||.:|.:....:|::|.|:|.|..|.|.||||::.|..|  :||.
  Fly   368 LASEDYEIPSPDGGDPVVLEKGTSVHIPVLAIHYDPEVYPEPHEFRPERFAPDACRERHPTAFLG 432

  Rat   450 FSGGARNCIGKQFAMNELKVAVALTLL---RFELLP-DPTRIPIPIPRLVLKSKNGIYLRLKKLQ 510
            |..|.|||||.:|...::||.: :|||   ||.|.| .||::.:....|:|...:|:.|::..::
  Fly   433 FGDGPRNCIGLRFGRMQVKVGL-ITLLRRFRFSLPPGSPTQLKVTKRNLILLPSDGVRLQVDPVE 496

  Rat   511  510
              Fly   497  496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a8XP_038965258.1 CYP4B-like 72..505 CDD:410771 132/456 (29%)
Cyp6a16NP_001285631.1 p450 32..492 CDD:278495 140/484 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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