DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BSCL2 and bscl2

DIOPT Version :10

Sequence 1:NP_001372956.1 Gene:BSCL2 / 26580 HGNCID:15832 Length:464 Species:Homo sapiens
Sequence 2:NP_001410660.2 Gene:bscl2 / 567403 ZFINID:ZDB-GENE-051113-140 Length:405 Species:Danio rerio


Alignment Length:398 Identity:197/398 - (49%)
Similarity:263/398 - (66%) Gaps:53/398 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    72 PALLWAQEVGQVLAGRARRLLLQFGVLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRT 136
            |.|||.|:|..|...||||.||:..:|.|.::||||||:||||||||||||:||..:|||:||||
Zfish     7 PLLLWLQDVAAVTLLRARRTLLRAAILLCVLVLLLWVSIFLYGSFYYSYMPSVSFSTPVHYYYRT 71

Human   137 DCDSSTTSLCSFPVANVSLTKGGRDRVLMYGQPYRVTLELELPESPVNQDLGMFLVTISCYTRGG 201
            ||::|...|||||:|||||.|.|||:|:|.||.||::||||:||||||:.||||:|.:|||:..|
Zfish    72 DCEASDAVLCSFPMANVSLLKNGRDQVMMSGQAYRISLELEMPESPVNEQLGMFMVKMSCYSNDG 136

Human   202 RIISTSSRSVMLHYRSDLLQMLDTLVFSSLLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEI 266
            .::.:.:||.||||||:|||.|.||:||.|||.|.:|||||:||||:.|.:.:.|.|..||:|||
Zfish   137 TVVHSVARSTMLHYRSNLLQTLSTLLFSPLLLSGVSEQKQLVEVELFPDLKLDIYHPAVGAVIEI 201

Human   267 HSKRIQLYGAYLRIHAHFTGLRYLLYNFPMTCAFIGVASNFTFLSVIVLFSYMQWVWGGIWPRHR 331
            .|:|:|:|.|.|||||:|||:|:||||||:..|.:|||||||||||||||||:|::|||::|..:
Zfish   202 QSRRVQIYSAQLRIHAYFTGVRFLLYNFPVMSAIVGVASNFTFLSVIVLFSYLQFIWGGLYPPEQ 266

Human   332 FSLQVNI-------RKRDNSRKEVQRRISAHQPGAGPEGQE------------------ESTP-- 369
            ..::|.|       ::|:.:||.:....|......|.:|.|                  ..||  
Zfish   267 VRVKVMIGDSTRLQQRREEARKRMHSSASTPVMTYGRDGSELLSDPLQHPKQTVRNKGDLDTPSV 331

Human   370 ---------QSDVTEDGESP---EDPSGTEGQLSEEEKPDQQPLSG-------EEELEPEASDGS 415
                     |.|.|:|  :|   :.|.|.|..|:||:..|:|.::|       ||..:|::||.|
Zfish   332 IGTEDLNNQQEDETDD--APVFLDAPRGGESSLTEEDADDKQRMAGERNDTQEEETAQPQSSDTS 394

Human   416 -----GSW 418
                 |.|
Zfish   395 LRQRPGPW 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BSCL2NP_001372956.1 Seipin 122..286 CDD:467827 100/163 (61%)
PHA03169 <355..>414 CDD:223003 23/97 (24%)
bscl2NP_001410660.2 None

Return to query results.
Submit another query.