DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BSCL2 and Seipin

DIOPT Version :10

Sequence 1:NP_001372956.1 Gene:BSCL2 / 26580 HGNCID:15832 Length:464 Species:Homo sapiens
Sequence 2:NP_570012.1 Gene:Seipin / 31245 FlyBaseID:FBgn0040336 Length:370 Species:Drosophila melanogaster


Alignment Length:236 Identity:95/236 - (40%)
Similarity:151/236 - (63%) Gaps:4/236 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    86 GRARRLLLQFGVLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSTTSLCSFPV 150
            |..|.|:|:.|::...::|::|::||:|.:|||.|||.:||..|||..::|..::||.  |:||.
  Fly    46 GTVRELVLRLGLIAFAVVLIIWLAVFMYAAFYYVYMPAISHTRPVHMQFKTCLETSTP--CTFPH 108

Human   151 ANVSLTKGGRDRVLMYGQPYRVTLELELPESPVNQDLGMFLVTISCYTRGGRIISTSSRSVMLHY 215
            |:|||||  :.::||.||.|:|.:.:::||||.|.:||||:|..........:...|.||.|:.|
  Fly   109 AHVSLTK--KQQLLMVGQAYKVIVNIDMPESPQNLELGMFMVCAEMRDYDSMLRGHSCRSAMMRY 171

Human   216 RSDLLQMLDTLVFSSLLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRI 280
            ||.|::|:.|.|.|.|.:.|:.|:.|.:.||:::.|.|....|.|...:||.|::||.|...|.|
  Fly   172 RSPLIRMISTWVLSPLYVLGWKEEFQQVPVEIFSRYLEERQHPITDVYVEIQSQKIQFYTVTLHI 236

Human   281 HAHFTGLRYLLYNFPMTCAFIGVASNFTFLSVIVLFSYMQW 321
            .|.||||||:::|:|:..|.:.:::|..|:.|:.|.|:..|
  Fly   237 VADFTGLRYIMFNWPVLSAIVAISTNLFFILVVFLLSWYHW 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BSCL2NP_001372956.1 Seipin 122..286 CDD:467827 66/163 (40%)
PHA03169 <355..>414 CDD:223003
SeipinNP_570012.1 Seipin 82..242 CDD:467827 66/163 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.