DRSC/TRiP Functional Genomics Resources

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Protein Alignment DAZAP1 and Hrb87F

DIOPT Version :9

Sequence 1:XP_011526206.1 Gene:DAZAP1 / 26528 HGNCID:2683 Length:550 Species:Homo sapiens
Sequence 2:NP_001163602.1 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster


Alignment Length:418 Identity:122/418 - (29%)
Similarity:164/418 - (39%) Gaps:104/418 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   153 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHT 217
            ||||:||||:.||.:.|:::|.::|.:||.|:|||..|.:||||||:.:.....:.....:|||.
  Fly    24 RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHK 88

Human   218 LDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVV 282
            :|||.::||...||   .|...|..|         :...|:||||:..:..|..||||||.||.:
  Fly    89 IDGRTVEPKRAVPR---QEIDSPNAG---------ATVKKLFVGGLRDDHDEECLREYFKDFGQI 141

Human   283 TEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 347
            ..|.::.|.:..:.|||.||.|:|...||:.:....|.|..|.::||:|..:....:..|  |..
  Fly   142 VSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGG--GGG 204

Human   348 QWGSRVVPNAANGWAGQPPPTW--QQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIV 410
            :.|.|.......|..||....|  |......|.|..||.. ||:|                    
  Fly   205 RGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGG-GGFG-------------------- 248

Human   411 STPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAP 475
             ...|.|...||...| |...|...|.||                                    
  Fly   249 -NSGGNFGGGQGGGSG-GWNQQGGSGGGP------------------------------------ 275

Human   476 DMSKPPTAQPDFPYGQYAGYGQDLS-----------GFGQGFSDPSQQPPSYGG----------- 518
             .:........:..|...|||...|           |.|.||.:..||  ||||           
  Fly   276 -WNNQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQ--SYGGGPQRNSNFGNN 337

Human   519 -PSVPGSGGPPAGGSGFGRGQNHNVQGF 545
             |:....||   ||.||.:|.....|||
  Fly   338 RPAPYSQGG---GGGGFNKGNQGGGQGF 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAZAP1XP_011526206.1 RRM <151..341 CDD:223796 70/187 (37%)
RRM1_DAZAP1 154..235 CDD:241018 35/80 (44%)
RRM2_DAZAP1 254..333 CDD:240773 31/78 (40%)
Hrb87FNP_001163602.1 RRM1_hnRNPA_like 25..102 CDD:241022 33/76 (43%)
RRM_SF 116..188 CDD:302621 28/71 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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