DRSC/TRiP Functional Genomics Resources

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Protein Alignment OPN1MW and dop-2

DIOPT Version :9

Sequence 1:NP_000504.1 Gene:OPN1MW / 2652 HGNCID:4206 Length:364 Species:Homo sapiens
Sequence 2:NP_001256126.1 Gene:dop-2 / 179347 WormBaseID:WBGene00001053 Length:849 Species:Caenorhabditis elegans


Alignment Length:265 Identity:58/265 - (21%)
Similarity:117/265 - (44%) Gaps:46/265 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    60 MIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISVVNQVY---GYFVL 121
            :|.:.:.::..|.||:.:.::::.|:..:|::::.||||||...:|....:|  .||   |.:.|
 Worm    44 LIVIPLITLLGNLLVIISVLRYRALQSAINFLILGLAVADLLVAIIVMPYAV--YVYVTNGDWYL 106

Human   122 GHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKP--FGNVRFDAKLAIVGIAFSWIWAAVWT 184
            |:.||.:...:...|....:..||:||::|:..|..|  :.....:.|.....||..|:.:....
 Worm   107 GNLMCDIYMASDVCCSTASILLLAVISFDRYRAVSLPIQYSRQSQNVKRVWTLIAVIWLVSLTLA 171

Human   185 APPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIR-- 247
            :|.:||.:...|......|.   |..:.: .:.|.||..::.|     .:::..|:::.:|::  
 Worm   172 SPMVFGVNVRPPDANPYECR---FYNAEF-SILSSMISFVIPC-----FLVLFVYIRIIIALKKR 227

Human   248 -AVAKQQKESES--------TQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGYPFHPLM 303
             ..||.::|..:        ....|::|.......::|     ||..              :.:|
 Worm   228 EKAAKMRREKNTIAHGLTMRPDTGEEQVDEEAAGRIVA-----GPVV--------------NVMM 273

Human   304 AALPA 308
            ||||:
 Worm   274 AALPS 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OPN1MWNP_000504.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Required for 11-cis-retinal regeneration. /evidence=ECO:0000269|PubMed:30948514 17..43
7tm_4 61..>178 CDD:304433 32/121 (26%)
7tm_1 71..322 CDD:278431 57/254 (22%)
dop-2NP_001256126.1 7tmA_D2-like_dopamine_R 38..>233 CDD:320181 46/199 (23%)
TM helix 1 40..64 CDD:320181 4/19 (21%)
TM helix 2 73..95 CDD:320181 8/21 (38%)
TM helix 3 112..134 CDD:320181 4/21 (19%)
TM helix 4 158..174 CDD:320181 3/15 (20%)
TM helix 5 195..218 CDD:320181 4/28 (14%)
7tm_GPCRs <745..828 CDD:421689
TM helix 6 751..781 CDD:410628
TM helix 7 796..821 CDD:410628
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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