DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PLEK2 and grp-1

DIOPT Version :9

Sequence 1:NP_057529.1 Gene:PLEK2 / 26499 HGNCID:19238 Length:353 Species:Homo sapiens
Sequence 2:NP_498764.1 Gene:grp-1 / 176140 WormBaseID:WBGene00001743 Length:393 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PLEK2NP_057529.1 PH1_Pleckstrin_2 3..113 CDD:270113
PH 5..95 CDD:278594
DEP_PLEK2 128..236 CDD:239891
PH2_Pleckstrin_2 242..353 CDD:270114
PH 248..352 CDD:278594
grp-1NP_498764.1 Sec7 60..241 CDD:238100
PH_GRP1-like 261..382 CDD:269954
PH 263..380 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.