DRSC/TRiP Functional Genomics Resources

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Protein Alignment LHX6 and Awh

DIOPT Version :10

Sequence 1:NP_055183.2 Gene:LHX6 / 26468 HGNCID:21735 Length:392 Species:Homo sapiens
Sequence 2:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster


Alignment Length:22 Identity:8/22 - (36%)
Similarity:12/22 - (54%) Gaps:0/22 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   129 LRQQEELDRKAAELERKERELQ 150
            |.||.:||....|.|..:.|::
  Fly   233 LEQQRDLDNSIRESETVDGEVE 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LHX6NP_055183.2 LIM1_Lhx6 99..152 CDD:188766 8/22 (36%)
LIM2_Lhx6 160..214 CDD:188768
Homeodomain 249..305 CDD:459649
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759
LIM2_AWH 69..123 CDD:188765
Homeodomain 149..205 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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