DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psma5 and Prosalpha2

DIOPT Version :10

Sequence 1:NP_036097.1 Gene:Psma5 / 26442 MGIID:1347009 Length:241 Species:Mus musculus
Sequence 2:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster


Alignment Length:215 Identity:75/215 - (34%)
Similarity:120/215 - (55%) Gaps:5/215 - (2%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKI 67
            :....|...:.||||.|:|.|:|||:.|:..|:.::||..|.||.:|.|.:..|||.|..|:.::
  Fly     1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRV 65

Mouse    68 VEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGA 132
            ..|..|||...||:..|.:.|:.:||...|.::.||.|.:.|..:.|.|:.|.    :|....|.
  Fly    66 EMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLM----QEYTQSGG 126

Mouse   133 MSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKS 197
            : |||||:||..|.|...|.|:..||||.:....|.|:|..:...::.|::.|.:.:.|.:|:.:
  Fly   127 V-RPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHT 190

Mouse   198 SLIILKQVMEEKLNATNIEL 217
            :::.||:..|.|:.|.|||:
  Fly   191 AILTLKEGFEGKMTADNIEI 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Psma5NP_036097.1 proteasome_alpha_type_5 8..220 CDD:239722 75/210 (36%)
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 75/210 (36%)

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