DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psma5 and Prosalpha2

DIOPT Version :9

Sequence 1:NP_036097.1 Gene:Psma5 / 26442 MGIID:1347009 Length:241 Species:Mus musculus
Sequence 2:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster


Alignment Length:215 Identity:75/215 - (34%)
Similarity:120/215 - (55%) Gaps:5/215 - (2%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKI 67
            :....|...:.||||.|:|.|:|||:.|:..|:.::||..|.||.:|.|.:..|||.|..|:.::
  Fly     1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRV 65

Mouse    68 VEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGA 132
            ..|..|||...||:..|.:.|:.:||...|.::.||.|.:.|..:.|.|:.|.    :|....|.
  Fly    66 EMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLM----QEYTQSGG 126

Mouse   133 MSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKS 197
            : |||||:||..|.|...|.|:..||||.:....|.|:|..:...::.|::.|.:.:.|.:|:.:
  Fly   127 V-RPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHT 190

Mouse   198 SLIILKQVMEEKLNATNIEL 217
            :::.||:..|.|:.|.|||:
  Fly   191 AILTLKEGFEGKMTADNIEI 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Psma5NP_036097.1 proteasome_alpha_type_5 8..220 CDD:239722 75/210 (36%)
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 75/210 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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