Sequence 1: | XP_030098466.1 | Gene: | Psg16 / 26436 | MGIID: | 1347249 | Length: | 477 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246890.1 | Gene: | nrm / 40515 | FlyBaseID: | FBgn0262509 | Length: | 2192 | Species: | Drosophila melanogaster |
Alignment Length: | 502 | Identity: | 99/502 - (19%) |
---|---|---|---|
Similarity: | 190/502 - (37%) | Gaps: | 108/502 - (21%) |
- Green bases have known domain annotations that are detailed below.
Mouse 26 LAASLLACWLL--STTAQVTIESVPFNVVEGENVLLRVDNLPE---NLITLAWYRGLRKIVVYTL 85
Mouse 86 -NTKVSVMGQMYSGREIVSSNG-SLWIHNVTRKDTGLYTLRTVNRRGEIVSTSFTFLYVYTSLFI 148
Mouse 149 CGRPSFPAKLTIESVPPSVAEGGSVL------------LRVHNLQDKLRGLSWYKGAHVSRNLEI 201
Mouse 202 ARQIIAKNSSVPGPAHSGRETVYSNGSLLLQNVTRNDTGFYTLQTLSRHRKMELAHVQLQVDTSL 266
Mouse 267 SSCCD-TLDSTQLIIDPMPRYAAEGESILLR--------VLNLPEDFQVFCWYKGALIFQIFKIA 322
Mouse 323 EYSRARNSITKGPAQS--RTERVYTNGSLLLQDVTEKDTGLYTLQTIDRNFKIEKAHVQIQVN-- 383
Mouse 384 KPVTQ---------PFMRVTDSTVRVQSS--VVFTC--FSDNTGVS-IHWLFNNQSLQLTERITL 434
Mouse 435 SPSKCQ---LRINPVRKEDGGEYQCEVFN-----LASSKSSLPVSLA 473 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Psg16 | XP_030098466.1 | IgV_CEACAM_D1 | 42..139 | CDD:409430 | 22/101 (22%) |
Ig strand B | 57..61 | CDD:409430 | 2/3 (67%) | ||
Ig strand C | 70..74 | CDD:409430 | 1/3 (33%) | ||
Ig strand E | 106..110 | CDD:409430 | 1/4 (25%) | ||
Ig strand F | 120..125 | CDD:409430 | 1/4 (25%) | ||
Ig strand G | 134..137 | CDD:409430 | 0/2 (0%) | ||
IgV_CEACAM_D1 | 158..262 | CDD:409430 | 17/115 (15%) | ||
Ig strand B | 173..177 | CDD:409430 | 1/15 (7%) | ||
Ig strand C | 186..190 | CDD:409430 | 1/3 (33%) | ||
Ig strand E | 227..231 | CDD:409430 | 0/3 (0%) | ||
Ig strand F | 241..246 | CDD:409430 | 0/4 (0%) | ||
Ig strand G | 255..258 | CDD:409430 | 0/2 (0%) | ||
IgV_CEACAM_D1 | 278..382 | CDD:409430 | 20/113 (18%) | ||
Ig strand B | 293..297 | CDD:409430 | 1/11 (9%) | ||
Ig strand C | 306..310 | CDD:409430 | 0/3 (0%) | ||
Ig strand E | 347..351 | CDD:409430 | 1/3 (33%) | ||
Ig strand F | 361..366 | CDD:409430 | 0/4 (0%) | ||
Ig strand G | 375..378 | CDD:409430 | 0/2 (0%) | ||
IgI_hCEACAM_2_4_6_like | 388..475 | CDD:409402 | 22/108 (20%) | ||
Ig strand B | 404..408 | CDD:409402 | 1/3 (33%) | ||
Ig strand C | 417..421 | CDD:409402 | 1/3 (33%) | ||
Ig strand E | 439..443 | CDD:409402 | 1/6 (17%) | ||
Ig strand F | 453..458 | CDD:409402 | 2/4 (50%) | ||
Ig strand G | 468..471 | CDD:409402 | 1/2 (50%) | ||
nrm | NP_001246890.1 | Ig | 44..152 | CDD:299845 | 23/110 (21%) |
Ig | 176..248 | CDD:299845 | 13/94 (14%) | ||
Ig | 277..354 | CDD:299845 | 19/99 (19%) | ||
IG_like | 383..463 | CDD:214653 | 16/79 (20%) | ||
Ig | 394..463 | CDD:143165 | 14/68 (21%) | ||
Ig_3 | 585..652 | CDD:290638 | |||
Ig | 685..>719 | CDD:299845 | |||
IG_like | 788..869 | CDD:214653 | |||
Ig | <811..869 | CDD:299845 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |