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Protein Alignment Mapk1 and p38b

DIOPT Version :9

Sequence 1:	NP_001033752.1	Gene:	Mapk1 / 26413	MGIID:	1346858	Length:	358	Species:	Mus musculus
Sequence 2:	NP_477361.1	Gene:	p38b / 34780	FlyBaseID:	FBgn0024846	Length:	365	Species:	Drosophila melanogaster

Alignment Length:	343	Identity:	163/343 - (47%)
Similarity:	235/343 - (68%)	Gaps:	12/343 - (3%)

- Green bases have known domain annotations that are detailed below.

Mouse    17 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 80
            :::...|.||..:|:||||.||.|.......:|||||:: ||:...:.:||.||:::|....|||
  Fly    18 WEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVHAKRTYRELRLLKHMDHEN 82

Mouse    81 IIGINDIIR----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
            :||:.|:..    |.:::|.:.||:|..||:.||..:::||.||:||:.:.:|||||||||||||
  Fly    83 VIGLLDVFHPGQPADSLDQFQQVYMVTHLMDADLNNIIRTQKLSDDHVQFLVYQILRGLKYIHSA 147

Mouse   142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 206
            .|:||||||||:.:|..|:|:|.||||||.|:.:      :|.|||||||||||||||...|.::
  Fly   148 GVIHRDLKPSNIAVNEDCELRILDFGLARPAESE------MTGYVATRWYRAPEIMLNWMHYNQT 206

Mouse   207 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 271
            .||||||||:||:|:.|.:|||..::.|||.|:.:||:|:.|.::.|.:..||||:.|||...:.
  Fly   207 ADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNYIRSLPVMPRR 271

Mouse   272 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDL 336
            .:..:|..|:..|:|||:|||..:..|||..||||||||:|:|:||:||..| |.:....|.::|
  Fly   272 NFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYHDPTDEQTA-ALYDQSFEENEL 335

Mouse   337 PKEKLKELIFEETARFQP 354
            |.||.:|::|.|...|:|
  Fly   336 PVEKWREMVFSEVTAFKP 353

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.