Protein Alignment Esrrg and usp

DIOPT Version :9

• Sequence 1: NP_036065.1
• Gene: Esrrg / 26381
• MGIID: 1347056
• Length: 458
• Species: Mus musculus
• Sequence 2: NP_001259168.1
• Gene: usp / 31165
• FlyBaseID: FBgn0003964
• Length: 508
• Species: Drosophila melanogaster
• Alignment Length: 517
• Identity: 148/517 - (28%)
• Similarity: 230/517 - (44%)
• Gaps: 99/517 - (19%)

Mouse    11 SFSL-HYEEELLCRMSNKDRHIDSSCSSFI-KTEPSSPASLTDSVNHHSPGGSSDASGSYSSTMN 73
            ||.| |.:||:...:|..:   ||:.|||. |.|...|.....|:.|..||.:|.:|.:.|:
  Fly     9 SFRLSHIKEEVKPDISQLN---DSNNSSFSPKAESPVPFMQAMSMVHVLPGSNSASSNNNSA--- 67

Mouse    74 GHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYMLN---SMPKRLCLVCGDIA 135
            |......:|   .||   |||          ::..|:.     :|..|   |..|.||.:|||.|
  Fly    68 GDAQMAQAP---NSA---GGS----------AAAAVQQ-----QYPPNHPLSGSKHLCSICGDRA 111

Mouse   136 SGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRL 200
            ||.||||.|||.||.|||||::.::.|:|.....|.|.||:|..||.||:.|||..||.:|.|:.
  Fly   112 SGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQE 176

Mouse   201 DRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKP----------------------YNKI-----V 238
            :|.||.|.. ..|:.|.......|..|..:...                      .|.:     :
  Fly   177 ERQRGARNA-AGRLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGMGSGNGSDDFMTNSVSRDFSI 240

Mouse   239 SHLLVAEPEK-----------IYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTL 292
            ..::.||...           :...|..||......|::.||.:.:::|..::.:|:.:|.|:.:
  Fly   241 ERIIEAEQRAETQCGDRALTFLRVGPYSTVQPDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQV 305

Mouse   293 SLADQMSLLQSAWMEILILGVVYRSL-------------------SFE--------DELVYADDY 330
            .|.||:.||::||:|:||..|.:.|:                   |||        .:|.....:
  Fly   306 PLDDQVILLKAAWIELLIANVAWCSIVSLDDGGAGGGGGGLGHDGSFERRSPGLQPQQLFLNQSF 370

Mouse   331 IMDEDQSKLAGLLDLNNAIL-QLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 394
            ....:.:..||:..:.:.|| :|..|.|.:.|::.|...||||.|.|.|...|:....::..::.
  Fly   371 SYHRNSAIKAGVSAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEMCREK 435

Mouse   395 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEA 456
            ::..|.::...:|..|..|..::|:.||.||..|.|...|.:..::....|:.:||||.|||
  Fly   436 VYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQDHLFLFRITSDRPLEELFLEQLEA 497

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Esrrg	NP_036065.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	42..85		11/42 (26%)
		NR_DBD_ERR	122..218	CDD:143544	48/95 (51%)
		NR_LBD_ERR	237..456	CDD:132744	63/262 (24%)
usp	NP_001259168.1	NR_DBD_RXR	102..178	CDD:143514	40/75 (53%)
		NR_LBD_RXR_like	237..480	CDD:132741	57/242 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S1511
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.860