DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBX2 and bcd

DIOPT Version :10

Sequence 1:NP_001476.2 Gene:GBX2 / 2637 HGNCID:4186 Length:348 Species:Homo sapiens
Sequence 2:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster


Alignment Length:116 Identity:35/116 - (30%)
Similarity:49/116 - (42%) Gaps:23/116 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   248 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK--------- 303
            ||.||.|||.|:.|||:.|...:||:....:.::..|.|...||||||:|||.:.|         
  Fly    98 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQ 162

Human   304 -----RVKAGNANSKTGEPS---------RNPKIVVPIPVHVSRFAIRSQH 340
                 .:..|...|....||         ..|..:.|.|...:..|..::|
  Fly   163 SYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEH 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBX2NP_001476.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 2/2 (100%)
Homeodomain 248..304 CDD:459649 26/69 (38%)
bcdNP_788587.1 Homeodomain 106..153 CDD:459649 19/46 (41%)
Blue background indicates that the domain is not in the aligned region.

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