DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBX1 and ftz

DIOPT Version :9

Sequence 1:NP_001092304.1 Gene:GBX1 / 2636 HGNCID:4185 Length:363 Species:Homo sapiens
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:387 Identity:94/387 - (24%)
Similarity:126/387 - (32%) Gaps:152/387 - (39%)


- Green bases have known domain annotations that are detailed below.


Human    56 VLPQALAPAPLPAGLPPLAPLASFAGRLTNTFCAGLGQAV---PSMV--ALTTALPSFAEPPDAF 115
            |..|.:.|.. |...||.|     ..|......|.:..||   ||.:  .||..:......||.|
  Fly    69 VTTQTVPPVQ-PTTPPPKA-----TKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYF 127

Human   116 YGPQELAAAAAAAAATAARNNPEPGGRRPEGGLEADELLPAREKVAEPPPP---------PPPHF 171
            |...|....|.|.:.                            ||...|.|         |.|..
  Fly   128 YTTVEQVKKAPAVST----------------------------KVTASPAPSYDQEYVTVPTPSA 164

Human   172 SETFPSLPAEGKVYSSDEEKLEASAGDPAGSEQEEEGSGGDSEDDGFLDSSAGGPGALLGPKPKL 236
            ||....|    .|||...:..:...||                   |.......|.:|    |.|
  Fly   165 SEDVDYL----DVYSPQSQTQKLKNGD-------------------FATPPPTTPTSL----PPL 202

Human   237 KGSLGT-----GAEEGAPVTAG-----VTAPGG------------------KSRRRRTAFTSEQL 273
            :| :.|     |.:..:.|:..     ||||.|                  .|:|.|..:|..|.
  Fly   203 EG-ISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQT 266

Human   274 LELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIK----------AG------ 322
            ||||||||..:|::...|..||:||.|||.|:||||||||.|.|:.:          ||      
  Fly   267 LELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLP 331

Human   323 ----NVSSRSGEPVRNPKIVVPIPVH----------------------VNRFAVRSQHQQME 358
                ..::.:|.|      .||:|::                      :|.:..:..|||.:
  Fly   332 PLEATSTATTGAP------SVPVPMYHHHQTTAAYPAYSHSHSHGYGLLNDYPQQQTHQQYD 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBX1NP_001092304.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..265 30/173 (17%)
Homeobox 264..317 CDD:306543 30/52 (58%)
ftzNP_477498.1 FTZ 1..248 CDD:281812 50/240 (21%)
Homeobox 257..310 CDD:278475 30/52 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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