Sequence 1: | NP_060754.2 | Gene: | GBP3 / 2635 | HGNCID: | 4184 | Length: | 595 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_699217.2 | Gene: | gbp2 / 570622 | ZFINID: | ZDB-GENE-070912-618 | Length: | 627 | Species: | Danio rerio |
Alignment Length: | 592 | Identity: | 270/592 - (45%) |
---|---|---|---|
Similarity: | 397/592 - (67%) | Gaps: | 3/592 - (0%) |
- Green bases have known domain annotations that are detailed below.
Human 6 HMTGPMCLIENTN-GELVANPEALKILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKNKGFSLGS 69
Human 70 TVKSHTKGIWMWCVPHPKKPEHTLVLLDTEGLGDVKKGDNQNDSWIFTLAVLLSSTLVYNSMGTI 134
Human 135 NQQAMDQLYYVTELTHRIRSKSSPDENENED-SADFVSFFPDFVWTLRDFSLDLEADGQPLTPDE 198
Human 199 YLEYSLKLTQGTSQKDKNFNLPRLCIRKFFPKKKCFVFDLPIHRRKLAQLEKLQDEELDPEFVQQ 263
Human 264 VADFCSYIFSNSKTKTLSGGIKVNGPRLESLVLTYINAISRGDLPCMENAVLALAQIENSAAVQK 328
Human 329 AIAHYDQQMGQKVQLPAETLQELLDLHRVSEREATEVYMKNSFKDVDHLFQKKLAAQLDKKRDDF 393
Human 394 CKQNQEASSDRCSALLQVIFSPLEEEVKAGIYSKPGGYCLFIQKLQDLEKKYYEEPRKGIQAEEI 458
Human 459 LQTYLKSKESVTDAILQTDQILTEKEKEIEVECVKAESAQASAKMVEEMQIKYQQMMEEKEKSYQ 523
Human 524 EHVKQLTEKMERERAQLLEEQEKTLTSKLQEQARVLKERCQGESTQLQNEIQKLQKTLKKKTKRY 588
Human 589 MSHKLKI 595 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GBP3 | NP_060754.2 | GTPase domain (Globular). /evidence=ECO:0000250 | 1..309 | 171/304 (56%) | |
GBP | 18..280 | CDD:280433 | 153/263 (58%) | ||
GBP_C | 282..574 | CDD:202427 | 102/291 (35%) | ||
GBP_C | 288..574 | CDD:293879 | 100/285 (35%) | ||
coiled coil | 547..558 | CDD:293879 | 4/10 (40%) | ||
gbp2 | XP_699217.2 | P-loop_NTPase | 20..281 | CDD:304359 | 152/260 (58%) |
GBP_C | 284..579 | CDD:202427 | 104/295 (35%) | ||
GBP_C | 290..579 | CDD:293879 | 102/289 (35%) | ||
coiled coil | 548..559 | CDD:293879 | 4/10 (40%) | ||
coiled coil | 568..579 | CDD:293879 | 3/10 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 324 | 1.000 | Domainoid score | I6643 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 565 | 1.000 | Inparanoid score | I5681 |
NCBI | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG55037 | |
OrthoDB | 1 | 1.010 | - | - | D1027269at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000238 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6791 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100467 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10751 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X242 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.980 |