Sequence 1: | NP_060754.2 | Gene: | GBP3 / 2635 | HGNCID: | 4184 | Length: | 595 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_502809.2 | Gene: | atln-2 / 189829 | WormBaseID: | WBGene00012763 | Length: | 520 | Species: | Caenorhabditis elegans |
Alignment Length: | 463 | Identity: | 94/463 - (20%) |
---|---|---|---|
Similarity: | 180/463 - (38%) | Gaps: | 93/463 - (20%) |
- Green bases have known domain annotations that are detailed below.
Human 6 HMTGPMCLIENTN---GELVANPEALKIL----SAITQPVVVVAIVGLYRTGKSYLMN----KLA 59
Human 60 GKNK------------------GFSLGSTVKSHTKGIWMWCVP----HPKKPEHTLVLLDTEGLG 102
Human 103 DVKKGDNQNDSWIFTLAVLLSSTLVYNSMGTINQQAMDQLYYVTELTHRIRSKSSPDENENEDSA 167
Human 168 DFVSFFPDFVWTLRDFSLDLEADGQPLTPDEYLEYSLKLTQGTSQKDKNFNLPRLCIRKFFPKKK 232
Human 233 CFVFDLPIHRRKLAQLEKLQD--EELDPEFVQQVADFCSYIFS---------NSKTKTLSGGIKV 286
Human 287 NGPRLESLVLTYINAISRGDLPCMENAVLALAQIENSAAVQKAIAHYDQQMGQKVQLPAETLQEL 351
Human 352 LDLHRVSEREATEVYMKNSF--------------KDVDHLFQKKLAAQLDKKRDDFCKQNQEASS 402
Human 403 DRC-SALL 409 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GBP3 | NP_060754.2 | GTPase domain (Globular). /evidence=ECO:0000250 | 1..309 | 73/346 (21%) | |
GBP | 18..280 | CDD:280433 | 67/305 (22%) | ||
GBP_C | 282..574 | CDD:202427 | 23/143 (16%) | ||
GBP_C | 288..574 | CDD:293879 | 23/137 (17%) | ||
coiled coil | 547..558 | CDD:293879 | |||
atln-2 | NP_502809.2 | P-loop_NTPase | 41..310 | CDD:393306 | 64/284 (23%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2037 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1027269at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |