DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBP3 and Gbp2

DIOPT Version :10

Sequence 1:NP_060754.2 Gene:GBP3 / 2635 HGNCID:4184 Length:595 Species:Homo sapiens
Sequence 2:NP_034390.1 Gene:Gbp2 / 14469 MGIID:102772 Length:589 Species:Mus musculus


Alignment Length:579 Identity:390/579 - (67%)
Similarity:466/579 - (80%) Gaps:0/579 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAPEIHMTGPMCLIENTNGELVANPEALKILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKNKGF 65
            ||.||||:.||||||||..:||.|.|||:||||||||||||||||||||||||||||||||..||
Mouse     1 MASEIHMSEPMCLIENTEAQLVINQEALRILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKRTGF 65

Human    66 SLGSTVKSHTKGIWMWCVPHPKKPEHTLVLLDTEGLGDVKKGDNQNDSWIFTLAVLLSSTLVYNS 130
            ||||||:||||||||||||||||...||||||||||.||:|||||||.|||.||||||||.:|||
Mouse    66 SLGSTVQSHTKGIWMWCVPHPKKAGQTLVLLDTEGLEDVEKGDNQNDCWIFALAVLLSSTFIYNS 130

Human   131 MGTINQQAMDQLYYVTELTHRIRSKSSPDENENEDSADFVSFFPDFVWTLRDFSLDLEADGQPLT 195
            :|||||||||||:||||||..|:||||||::..:|||:||.|||.||||||||||:||.:|:|:|
Mouse   131 IGTINQQAMDQLHYVTELTDLIKSKSSPDQSGVDDSANFVGFFPTFVWTLRDFSLELEVNGKPVT 195

Human   196 PDEYLEYSLKLTQGTSQKDKNFNLPRLCIRKFFPKKKCFVFDLPIHRRKLAQLEKLQDEELDPEF 260
            .|||||:||.|.:|..:|.|:||.|||||||||||:|||:||.|..|::|::||.|::|||..||
Mouse   196 SDEYLEHSLTLKKGADKKTKSFNEPRLCIRKFFPKRKCFIFDRPAQRKQLSKLETLREEELCGEF 260

Human   261 VQQVADFCSYIFSNSKTKTLSGGIKVNGPRLESLVLTYINAISRGDLPCMENAVLALAQIENSAA 325
            |:|||:|.|||.|.|..|||.|||.||||||:|||.||:.|||.|.|||||:|||.|||||||||
Mouse   261 VEQVAEFTSYILSYSSVKTLCGGIIVNGPRLKSLVQTYVGAISNGSLPCMESAVLTLAQIENSAA 325

Human   326 VQKAIAHYDQQMGQKVQLPAETLQELLDLHRVSEREATEVYMKNSFKDVDHLFQKKLAAQLDKKR 390
            |||||.||::||.||:|:|.|||||||||||..|.||.||::||||||||..||.:|...|..||
Mouse   326 VQKAITHYEEQMNQKIQMPTETLQELLDLHRPIESEAIEVFLKNSFKDVDQKFQTELGNLLVAKR 390

Human   391 DDFCKQNQEASSDRCSALLQVIFSPLEEEVKAGIYSKPGGYCLFIQKLQDLEKKYYEEPRKGIQA 455
            |.|.|:|.:.||.|||.||:.||.|||||||.|.:||||||.||:|..|:|||||.:.|.||:||
Mouse   391 DAFIKKNMDVSSARCSDLLEDIFGPLEEEVKLGTFSKPGGYYLFLQMRQELEKKYNQAPGKGLQA 455

Human   456 EEILQTYLKSKESVTDAILQTDQILTEKEKEIEVECVKAESAQASAKMVEEMQIKYQQMMEEKEK 520
            |.:|:.|..||..|.:.:|||||.|||..||:|.|..|||:|:|:.:.:|:.|.:::.||::|||
Mouse   456 EAMLKNYFDSKADVVETLLQTDQSLTEAAKEVEEERTKAEAAEAANRELEKKQKEFELMMQQKEK 520

Human   521 SYQEHVKQLTEKMERERAQLLEEQEKTLTSKLQEQARVLKERCQGESTQLQNEIQKLQK 579
            |||||||:|||||:.|:.|||.|||..:.:||:||.:.|||..:.||.:|..||..|::
Mouse   521 SYQEHVKKLTEKMKDEQKQLLAEQENIIAAKLREQEKFLKEGFENESKKLIREIDTLKQ 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP3NP_060754.2 GTPase domain (Globular). /evidence=ECO:0000250|UniProtKB:P32455 1..309 228/307 (74%)
GBP 18..280 CDD:460516 193/261 (74%)
GBP_C 282..574 CDD:460721 178/291 (61%)
Gbp2NP_034390.1 GTPase domain (Globular). /evidence=ECO:0000250|UniProtKB:P32455 1..309 228/307 (74%)
GBP 18..280 CDD:460516 193/261 (74%)
GBP_C 282..578 CDD:460721 180/295 (61%)

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