DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBP3 and gbp6

DIOPT Version :9

Sequence 1:NP_060754.2 Gene:GBP3 / 2635 HGNCID:4184 Length:595 Species:Homo sapiens
Sequence 2:NP_001120628.1 Gene:gbp6 / 100145795 XenbaseID:XB-GENE-6050518 Length:628 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP3NP_060754.2 GTPase domain (Globular). /evidence=ECO:0000250 1..309
GBP 18..280 CDD:280433
GBP_C 282..574 CDD:202427
GBP_C 288..574 CDD:293879
coiled coil 547..558 CDD:293879
gbp6NP_001120628.1 P-loop_NTPase 25..283 CDD:422963
GBP_C 291..582 CDD:293879
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 345 1.000 Domainoid score I7575
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 596 1.000 Inparanoid score I6507
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0000238
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10751
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X242
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.160

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