DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBP3 and gbp5

DIOPT Version :10

Sequence 1:NP_060754.2 Gene:GBP3 / 2635 HGNCID:4184 Length:595 Species:Homo sapiens
Sequence 2:NP_001120244.2 Gene:gbp5 / 100145295 XenbaseID:XB-GENE-5756296 Length:636 Species:Xenopus tropicalis


Alignment Length:578 Identity:300/578 - (51%)
Similarity:408/578 - (70%) Gaps:5/578 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     7 MTGPMCLIENTNGE-LVANPEALKILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKNKGFSLGST 70
            |..|||||.|..|| |:.|.|||:||..||||||||||||.||||||||||||||...||:||||
 Frog     6 MEEPMCLIGNKEGEDLIVNQEALQILLKITQPVVVVAIVGKYRTGKSYLMNKLAGARNGFALGST 70

Human    71 VKSHTKGIWMWCVPHPKKPEHTLVLLDTEGLGDVKKGDNQNDSWIFTLAVLLSSTLVYNSMGTIN 135
            |:|.||||||||||||.|..:|||||||||||||:|||::||:|||:||:||||||||||||||:
 Frog    71 VQSKTKGIWMWCVPHPTKQGNTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTLVYNSMGTID 135

Human   136 QQAMDQLYYVTELTHRIRSKS---SPDENENEDSADFVSFFPDFVWTLRDFSLDLEADGQPLTPD 197
            |||||.|:||||||..|:.||   ...|.|:::|.:|..|||.|:|.:|||:|.||.:|.|:|.|
 Frog   136 QQAMDNLHYVTELTELIKVKSDEAQATEEEDDESGEFKRFFPSFIWCVRDFTLKLEKNGSPITED 200

Human   198 EYLEYSLKLTQGTSQKDKNFNLPRLCIRKFFPKKKCFVFDLPIHRRKLAQLEKLQDEELDPEFVQ 262
            :||..:|:|.:|..:|.:::||||.|||.:|...||||||.|.....|.:||:||:.||:.:||:
 Frog   201 QYLLDALELKKGVGKKVQDYNLPRQCIRHYFHSHKCFVFDRPASTLALQRLEELQESELESKFVE 265

Human   263 QVADFCSYIFSNSKTKTLSGGIKVNGPRLESLVLTYINAISRGDLPCMENAVLALAQIENSAAVQ 327
            :.|:|||.|:..|..|||.||..|.|..|.:|.::|..||..|.:|||||||:||||||||.|||
 Frog   266 KAAEFCSCIYGKSNAKTLVGGYTVTGRLLGNLAVSYTEAIRSGSIPCMENAVIALAQIENSRAVQ 330

Human   328 KAIAHYDQQMGQKV-QLPAETLQELLDLHRVSEREATEVYMKNSFKDVDHLFQKKLAAQLDKKRD 391
            :|:..|:::|.::: :.|.||.:|.|.:|:..|:|||:|:|..||||.:..:||:|..:|.:|:.
 Frog   331 EALTKYEEEMSKQIAKFPTETQEEFLSIHQECEKEATQVFMGLSFKDENLEYQKQLIDELAEKKS 395

Human   392 DFCKQNQEASSDRCSALLQVIFSPLEEEVKAGIYSKPGGYCLFIQKLQDLEKKYYEEPRKGIQAE 456
            .:...|:|.|:.:|.|:||.:...||.|:..|.:||||||..||.:...|..:|.....||::|.
 Frog   396 KYSLYNEEESAKKCKAILQKLSENLEREILNGKFSKPGGYTQFISEKNLLVDEYNRTKGKGVKAL 460

Human   457 EILQTYLKSKESVTDAILQTDQILTEKEKEIEVECVKAESAQASAKMVEEMQIKYQQMMEEKEKS 521
            ||||.:|..||:|..||||.||.||.|||||..:..:.|:|:...::|||...:.::.:|.::||
 Frog   461 EILQEFLNEKENVEAAILQADQSLTHKEKEIAEQRARTETAEREKQIVEENNRRLEKDIEAQKKS 525

Human   522 YQEHVKQLTEKMERERAQLLEEQEKTLTSKLQEQARVLKERCQGESTQLQNEIQKLQK 579
            .:||.|.:.||||.||.:|:|:.|..:..||:||..:|.:....||..|:|:|:.:::
 Frog   526 LEEHKKMMEEKMEEERKKLMEQNEWMIKEKLKEQEEMLTKGFHKESEMLKNQIEDIKR 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP3NP_060754.2 GTPase domain (Globular). /evidence=ECO:0000250|UniProtKB:P32455 1..309 183/305 (60%)
GBP 18..280 CDD:460516 164/265 (62%)
GBP_C 282..574 CDD:460721 126/292 (43%)
gbp5NP_001120244.2 GBP 19..283 CDD:460516 163/263 (62%)
GBP_C 285..582 CDD:460721 127/296 (43%)

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