DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBP2 and mto1

DIOPT Version :9

Sequence 1:NP_004111.2 Gene:GBP2 / 2634 HGNCID:4183 Length:591 Species:Homo sapiens
Sequence 2:NP_588284.1 Gene:mto1 / 2539467 PomBaseID:SPCC417.07c Length:1115 Species:Schizosaccharomyces pombe


Alignment Length:604 Identity:130/604 - (21%)
Similarity:229/604 - (37%) Gaps:173/604 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    90 EHTLVLLDTEGLGDIEKGD---NENDSWIFALAILLSSTF------VYNSMGTINQQAMDQLHYV 145
            |..:..|.||...:|||.:   .||:..|        |.|      :.:.:..::::..|:.|..
pombe   566 EEVVGKLRTEAEREIEKFEKTIRENEESI--------SLFKEEVEKLTDEITQLSERYNDKCHEF 622

Human   146 TELTDRIKANSSPGNNSVDDSADFVSFFPAFVWTLRDFTL-ELEVDG-EPITADDYLELSLK--- 205
            .||..|::......|.:.:||....|..      |....: |.|||. .....::...::||   
pombe   623 DELQKRLQTLEEENNKAKEDSTSKTSNL------LEQLKMTEAEVDSLRKENEENKQVIALKESE 681

Human   206 LRKGTDKK------SKSFNDPRLCIRKFFPKRKCFVFDWPAPKKYLAHLEQLKEEELNPDFIEQV 264
            |.|..|.|      .:|.||.   :.:...:.:.......:...||::|::...:||: ...:::
pombe   682 LVKSNDNKLLLNEQIESLNDQ---LSQLKTEMESVTTSKESLADYLSNLKERHNDELD-SLNKKL 742

Human   265 AEFCSYILSHSNVKTLSGGIPVNGPRLESLVLTYVNAISSGDLPCMENAVL-------------- 315
            .||...:.|:|::|:          .:|.....||....:.|  .::||::              
pombe   743 REFEGILSSNSSLKS----------EIEERNNQYVTLRENFD--SLQNAIMETFDKQVTHCSVNH 795

Human   316 ALAQI-----EN------SAAVEKAIAHYEQQMGQKV-QLPT-----ETLQELLDLHRDSEREAI 363
            .:.||     ||      :..:.|.|.|.||.:.:|. .|.|     :.|:.|||..|.| ::||
pombe   796 LVQQIRKLKDENKKDQSGTDKLMKKIYHCEQSLKEKTNSLETLVSEKKELKNLLDAERRS-KKAI 859

Human   364 EVFMKNSFKDVDQMFQRKLGAQLEARRDDFCKQNSKASSDCCMALLQDIFGPLEEDVKQ------ 422
            ::.::|.   ..|.|:|.|...         ...|:.|....:.|||.....|:|.|::      
pombe   860 QLELENL---SSQAFRRNLSGS---------SSPSERSQSRELKLLQASEKRLKEQVEERNSLIK 912

Human   423 ---------GTFSKP-------------------GGYRLFTQKLQELKNKYYQVPRKGIQAKEVL 459
                     .|.|||                   ..:|...:.:||.|.|...:.|   :.|..|
pombe   913 NIVTRFTQLNTGSKPVNTNVEALTTISSMNQAVNMNFRELDKSIQEFKRKCQSMER---EFKTEL 974

Human   460 KKYLESKEDVADALLQT-DQSLSEKEKAIEVERIK----------AESAEAAKKM-LEEIQKK-- 510
            :|        .|.:|:. .:.||:.|     ||:|          ..|..|:|:: |:...||  
pombe   975 RK--------LDGVLEARSKRLSQLE-----ERVKLLGAGSTSSIPNSPRASKRVSLDSEDKKLV 1026

Human   511 ----NEEMME------QKEKSYQEHVKQLTEKMERDRAQLMAEQEKTLALKLQEQERLLKEGFEN 565
                ::..::      :::.....|:.||  ::.....||.||||.....||..:|||  :....
pombe  1027 PASPDKSAVQRGITALKRDAEGMSHIWQL--RLREMEFQLKAEQEGRKRDKLGARERL--QDLIR 1087

Human   566 ESKRLQKDI-WDIQMRSKS 583
            :::.|.:.| .|.:..|:|
pombe  1088 QNRSLSRQIKTDKESNSRS 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP2NP_004111.2 GTPase domain (Globular). /evidence=ECO:0000250 1..309 49/238 (21%)
GBP 18..280 CDD:308078 45/209 (22%)
GBP_C 282..578 CDD:308475 83/385 (22%)
mto1NP_588284.1 Cnn_1N 252..319 CDD:285263
Fib_alpha 511..611 CDD:285864 12/52 (23%)
Mto2_bdg 1052..1101 CDD:289572 16/52 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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