DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBP2 and Gbp2

DIOPT Version :9

Sequence 1:NP_004111.2 Gene:GBP2 / 2634 HGNCID:4183 Length:591 Species:Homo sapiens
Sequence 2:NP_034390.1 Gene:Gbp2 / 14469 MGIID:102772 Length:589 Species:Mus musculus


Alignment Length:591 Identity:421/591 - (71%)
Similarity:494/591 - (83%) Gaps:2/591 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAPEINLPGPMSLIDNTKGQLVVNPEALKILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKKNGF 65
            ||.||::..||.||:||:.|||:|.|||:||||||||||||||||||||||||||||||||:.||
Mouse     1 MASEIHMSEPMCLIENTEAQLVINQEALRILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKRTGF 65

Human    66 SLGSTVKSHTKGIWMWCVPHPKKPEHTLVLLDTEGLGDIEKGDNENDSWIFALAILLSSTFVYNS 130
            ||||||:||||||||||||||||...||||||||||.|:|||||:||.||||||:||||||:|||
Mouse    66 SLGSTVQSHTKGIWMWCVPHPKKAGQTLVLLDTEGLEDVEKGDNQNDCWIFALAVLLSSTFIYNS 130

Human   131 MGTINQQAMDQLHYVTELTDRIKANSSPGNNSVDDSADFVSFFPAFVWTLRDFTLELEVDGEPIT 195
            :|||||||||||||||||||.||:.|||..:.|||||:||.|||.||||||||:|||||:|:|:|
Mouse   131 IGTINQQAMDQLHYVTELTDLIKSKSSPDQSGVDDSANFVGFFPTFVWTLRDFSLELEVNGKPVT 195

Human   196 ADDYLELSLKLRKGTDKKSKSFNDPRLCIRKFFPKRKCFVFDWPAPKKYLAHLEQLKEEELNPDF 260
            :|:|||.||.|:||.|||:||||:|||||||||||||||:||.||.:|.|:.||.|:||||..:|
Mouse   196 SDEYLEHSLTLKKGADKKTKSFNEPRLCIRKFFPKRKCFIFDRPAQRKQLSKLETLREEELCGEF 260

Human   261 IEQVAEFCSYILSHSNVKTLSGGIPVNGPRLESLVLTYVNAISSGDLPCMENAVLALAQIENSAA 325
            :||||||.|||||:|:||||.|||.||||||:|||.|||.|||:|.|||||:|||.|||||||||
Mouse   261 VEQVAEFTSYILSYSSVKTLCGGIIVNGPRLKSLVQTYVGAISNGSLPCMESAVLTLAQIENSAA 325

Human   326 VEKAIAHYEQQMGQKVQLPTETLQELLDLHRDSEREAIEVFMKNSFKDVDQMFQRKLGAQLEARR 390
            |:|||.|||:||.||:|:|||||||||||||..|.||||||:|||||||||.||.:||..|.|:|
Mouse   326 VQKAITHYEEQMNQKIQMPTETLQELLDLHRPIESEAIEVFLKNSFKDVDQKFQTELGNLLVAKR 390

Human   391 DDFCKQNSKASSDCCMALLQDIFGPLEEDVKQGTFSKPGGYRLFTQKLQELKNKYYQVPRKGIQA 455
            |.|.|:|...||..|..||:||||||||:||.|||||||||.||.|..|||:.||.|.|.||:||
Mouse   391 DAFIKKNMDVSSARCSDLLEDIFGPLEEEVKLGTFSKPGGYYLFLQMRQELEKKYNQAPGKGLQA 455

Human   456 KEVLKKYLESKEDVADALLQTDQSLSEKEKAIEVERIKAESAEAAKKMLEEIQKKNEEMMEQKEK 520
            :.:||.|.:||.||.:.||||||||:|..|.:|.||.|||:||||.:.||:.||:.|.||:||||
Mouse   456 EAMLKNYFDSKADVVETLLQTDQSLTEAAKEVEEERTKAEAAEAANRELEKKQKEFELMMQQKEK 520

Human   521 SYQEHVKQLTEKMERDRAQLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSLE 585
            |||||||:|||||:.::.||:||||..:|.||:|||:.||||||||||:|.::|..::....|.:
Mouse   521 SYQEHVKKLTEKMKDEQKQLLAEQENIIAAKLREQEKFLKEGFENESKKLIREIDTLKQNKSSGK 585

Human   586 PICNIL 591
              |.||
Mouse   586 --CTIL 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP2NP_004111.2 GTPase domain (Globular). /evidence=ECO:0000250 1..309 237/307 (77%)
GBP 18..280 CDD:308078 205/261 (79%)
GBP_C 282..578 CDD:308475 200/295 (68%)
Gbp2NP_034390.1 GTPase domain (Globular). /evidence=ECO:0000250 1..309 237/307 (77%)
GBP 18..280 CDD:280433 205/261 (79%)
GBP_C 282..578 CDD:202427 200/295 (68%)
GBP_C 288..578 CDD:293879 195/289 (67%)
coiled coil 547..558 CDD:293879 6/10 (60%)
coiled coil 567..578 CDD:293879 4/10 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83969223
Domainoid 1 1.000 427 1.000 Domainoid score I10341
eggNOG 1 0.900 - - E1_KOG2037
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10289
Inparanoid 1 1.050 842 1.000 Inparanoid score I7422
Isobase 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55037
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0000238
OrthoInspector 1 1.000 - - mtm9915
orthoMCL 1 0.900 - - OOG6_100467
Panther 1 1.100 - - LDO PTHR10751
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X242
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1616.270

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