DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBA1 and Gba1

DIOPT Version :10

Sequence 1:NP_000148.2 Gene:GBA1 / 2629 HGNCID:4177 Length:536 Species:Homo sapiens
Sequence 2:NP_001121111.1 Gene:Gba1 / 684536 RGDID:1589149 Length:515 Species:Rattus norvegicus


Alignment Length:516 Identity:452/516 - (87%)
Similarity:477/516 - (92%) Gaps:1/516 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    21 MAGSLTGLLLLQAVSWASGARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSG 85
            ||....||.|.||:|||.||:|||||||||||||||||||||||.||.|.|||||||||||||||
  Rat     1 MAARFIGLFLFQAISWAYGAQPCIPKSFGYSSVVCVCNATYCDSLDPLTLPALGTFSRYESTRSG 65

Human    86 RRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSE 150
            ||||||.|.||||.||||||||||||:|||||||||||||||.||||||||||||.||||||||.
  Rat    66 RRMELSTGSIQANRTGTGLLLTLQPEEKFQKVKGFGGAMTDATALNILALSPPAQKLLLKSYFSS 130

Human   151 EGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLA 215
            |||.||||||||||||||||.|||||||:||||.||||||||||||||||||||:::.||:||.|
  Rat   131 EGIEYNIIRVPMASCDFSIRIYTYADTPNDFQLSNFSLPEEDTKLKIPLIHRALKMSPRPISLFA 195

Human   216 SPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLL 280
            |||||||||||||||||||||||.||||||:.||.||||||||||.|.::||||||||||||||.
  Rat   196 SPWTSPTWLKTNGAVNGKGSLKGHPGDIYHEAWANYFVKFLDAYATHNIKFWAVTAENEPSAGLF 260

Human   281 SGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVH 345
            :||||||||||.|||||||:.||||.||||: |:|:||:|||||||||.||:|||:|||||||||
  Rat   261 TGYPFQCLGFTAEHQRDFISHDLGPALANSS-HDVKLLILDDQRLLLPRWAQVVLSDPEAAKYVH 324

Human   346 GIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNL 410
            |||||||:|||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
  Rat   325 GIAVHWYMDFLAPAKATLGETHRLFPNMMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNL 389

Human   411 LYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGL 475
            ||||.||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
  Rat   390 LYHVTGWTDWNLALNPEGGPNWVRNFVDSPIIVDIPKDTFYKQPMFYHLGHFSKFIPEGSQRVGL 454

Human   476 VASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWRRQ 536
            |||:|.||:.|||:.|||||||||||||||||||||.|||:||:|||||||||||||||||
  Rat   455 VASEKTDLETVALIRPDGSAVVVVLNRSSKDVPLTISDPALGFMETISPGYSIHTYLWRRQ 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBA1NP_000148.2 Glyco_hydro_30 117..466 CDD:307945 309/348 (89%)
Glyco_hydro_30C 469..531 CDD:465376 52/61 (85%)
Gba1NP_001121111.1 Glyco_hydro_30 97..445 CDD:451560 309/348 (89%)
Glyco_hydro_30C 448..510 CDD:465376 52/61 (85%)

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