DRSC/TRiP Functional Genomics Resources

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Protein Alignment TSPAN17 and Tsp86D

DIOPT Version :9

Sequence 1:NP_001353420.1 Gene:TSPAN17 / 26262 HGNCID:13594 Length:355 Species:Homo sapiens
Sequence 2:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster


Alignment Length:307 Identity:117/307 - (38%)
Similarity:166/307 - (54%) Gaps:54/307 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     7 HFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG---LDPVW--- 65
            ||.  .|..|.||.:|..|.:||:.|.|.||||::|:.:|        |.|..|   ||.::   
  Fly    23 HFS--YVSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDK--------LMDGNGWLRLDTIYDVI 77

Human    66 -----LFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQL 125
                 :.::.|.::..:.||||:|||||||:|||.:|:.|.|.|.||::..|:.|||..::...|
  Fly    78 FNISLVMIIAGVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFL 142

Human   126 NL-FINNNVKAYRDDIDLQNLIDFAQEYWSCCGA--RGPNDWNLNIYFNCTDLNPSRERCGVPFS 187
            .. |.:..:.:||||.||||.|||||:.::|||.  .|..||:.|.||||:  :||.||||||:|
  Fly   143 EYQFTDKIIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCS--SPSVERCGVPYS 205

Human   188 CCVR--DPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAGVFMGIALLQV 250
            ||:.  |.:..::|..|||.|:::........|.|.||:.....|::.||.|:|||.:||||   
  Fly   206 CCINATDISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIAL--- 267

Human   251 PLWPHVPLPLPGPPSLSPHLSSVLQIFGICLAQNLVSDIKAVKANWS 297
                                   ||:|.|.||:.|...|...|:.||
  Fly   268 -----------------------LQLFVIYLAKTLEGQIDLQKSRWS 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TSPAN17NP_001353420.1 TM4SF9_like_LEL 115..235 CDD:239412 51/124 (41%)
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 100/267 (37%)
penumbra_like_LEL 132..255 CDD:239411 51/124 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X349
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.890

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