DRSC/TRiP Functional Genomics Resources

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Protein Alignment FBXO24 and MET30

DIOPT Version :10

Sequence 1:NP_036304.2 Gene:FBXO24 / 26261 HGNCID:13595 Length:618 Species:Homo sapiens
Sequence 2:NP_012218.1 Gene:MET30 / 854765 SGDID:S000001308 Length:640 Species:Saccharomyces cerevisiae


Alignment Length:360 Identity:71/360 - (19%)
Similarity:116/360 - (32%) Gaps:124/360 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    77 IQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICR----RLSP----------- 126
            |.:.|.||...|:|:|..:.|....:.||.:.::.|.:.||..:|.    |..|           
Yeast   184 ISILPQELSLKILSYLDCQSLCNATRVCRKWQKLADDDRVWYHMCEQHIDRKCPNCGWGLPLLHM 248

Human   127 ---RLQDQGSG-----------VRPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRF 177
               |:|...:|           .|||         |.:|.:.|         .|......|:.|.
Yeast   249 KRARIQQNSTGSSSNADIQTQTTRPW---------KVIYRERF---------KVESNWRKGHCRI 295

Human   178 LPTKDHVFILDYVGTLFFLKNALV-----STLGQMQW-----KRACRYVVLCRGAKDFASDPR-- 230
            ...|.|   :|.|.||.|....|.     ||:|  .|     |...|......|.|....|.|  
Yeast   296 QEFKGH---MDGVLTLQFNYRLLFTGSYDSTIG--IWDLFTGKLIRRLSGHSDGVKTLYFDDRKL 355

Human   231 ----CDTVYRKYLYVLATREPQEVVGTTSSRACDCVEVYLQSSGQRVFKMTFHHSMTFKQIVLVG 291
                .|...|.:.|:..                :|:..| :.....|..:.     :::::::.|
Yeast   356 ITGSLDKTIRVWNYITG----------------ECISTY-RGHSDSVLSVD-----SYQKVIVSG 398

Human   292 QETQRALLLLTEEGKIYSL-----VVNETQLDQPRSYTVQLALRKVSHYLPHLRVACMTSNQSST 351
            ...:...:...|....|:|     .||..:| .|:|:                  :|.:.:..:|
Yeast   399 SADKTVKVWHVESRTCYTLRGHTEWVNCVKL-HPKSF------------------SCFSCSDDTT 444

Human   352 LYVTDQGGVYFEVHTPG---VYRDLFGTLQAFDPL 383
            :.:.|       :.|..   |:|...|.:|...||
Yeast   445 IRMWD-------IRTNSCLKVFRGHVGQVQKIIPL 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXO24NP_036304.2 F-box_FBXO24 76..122 CDD:438870 13/44 (30%)
ATS1 <401..>463 CDD:444065
MET30NP_012218.1 F-box_SpPof1-like 183..228 CDD:438918 13/43 (30%)
WD40 295..590 CDD:238121 43/231 (19%)
WD40 repeat 305..340 CDD:293791 11/36 (31%)
WD40 repeat 346..380 CDD:293791 8/50 (16%)
WD40 repeat 385..418 CDD:293791 4/37 (11%)
WD40 repeat 425..460 CDD:293791 9/60 (15%)
WD40 repeat 488..549 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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