DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATA4 and pnr

DIOPT Version :9

Sequence 1:NP_001295022.1 Gene:GATA4 / 2626 HGNCID:4173 Length:443 Species:Homo sapiens
Sequence 2:NP_476685.1 Gene:pnr / 44849 FlyBaseID:FBgn0003117 Length:540 Species:Drosophila melanogaster


Alignment Length:422 Identity:162/422 - (38%)
Similarity:204/422 - (48%) Gaps:89/422 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    16 GAYEAGGPGAFMHGAGAASSPVYVPTPRVPSSVLGLSYLQGGGAGSASGGASGGSSGGAASGAGP 80
            |.|:.....|......|::|..:|...::..|....:|.....||||           |::|.|.
  Fly    25 GDYQNVTLSAASASTSASASATHVAAVKMYHSSAVAAYTDLAAAGSA-----------ASAGVGV 78

Human    81 GTQQGSPGWSQAGADGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGAAGAGLAG 145
            |..    |:.|...:...|.|   |.|     ....:||...:|||:.|                
  Fly    79 GVS----GYHQQAVNAPVYVP---SNR-----QYNHVAAHFGSAAAQNA---------------- 115

Human   146 REQYGRAGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDSPVLHSLPGRANPAARHPNLVDMFD 210
               :...||..:::..|....|.:..||.:|...|.....||              :.:.:|.  
  Fly   116 ---WTTEGFGSAHAQFYSPNAAVMMGSWRSAYDPSGFQRSSP--------------YESAMDF-- 161

Human   211 DFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRL---SASRRVGLSC 272
            .|.||||||||||:||||||||||||||||||||||||||:|||||||.:||   :|:||:||.|
  Fly   162 QFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLCC 226

Human   273 ANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSKTPAAPSG 337
            .||.|.||||||||.:|||||||||||.|||||.|||||||:||||||||||.          :|
  Fly   227 TNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKK----------TG 281

Human   338 SESLPPASGASSNSSNATTSSSEEMRPIKTE----PGLSSHYG-----HSSSVSQTFSVSAMSGH 393
            |.|   |.||.:.|  .|.|:.|.::..|.|    |.||....     |:...|.|.|.|.:.||
  Fly   282 SGS---AVGAGTGS--GTGSTLEAIKECKEEHDLKPSLSLERHSLSKLHTDMKSGTSSSSTLMGH 341

Human   394 GPSIHPVLSALKLSPQGYASPVSQSPQTSSKQ 425
                |......:...|.......|..|::.:|
  Fly   342 ----HSAQQQQQQQQQQQQQQQQQQQQSAHQQ 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATA4NP_001295022.1 GATA-N 1..205 CDD:368398 38/188 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..107 12/46 (26%)
ZnF_GATA 217..267 CDD:238123 43/52 (83%)
ZnF_GATA 271..322 CDD:238123 41/50 (82%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 315..379 26/72 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 410..429 3/16 (19%)
pnrNP_476685.1 ZnF_GATA 164..212 CDD:214648 43/47 (91%)
ZnF_GATA 168..212 CDD:238123 40/43 (93%)
ZnF_GATA 223..270 CDD:214648 37/46 (80%)
ZnF_GATA 226..276 CDD:238123 41/49 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I8514
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 223 1.000 Inparanoid score I3525
Isobase 1 0.950 - 0 Normalized mean entropy S2600
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 1 1.000 - - otm40560
orthoMCL 1 0.900 - - OOG6_105861
Panther 1 1.100 - - LDO PTHR10071
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1745
SonicParanoid 1 1.000 - - X1091
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.800

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