DRSC/TRiP Functional Genomics Resources

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Protein Alignment ARL5A and Arf102F

DIOPT Version :9

Sequence 1:NP_036229.1 Gene:ARL5A / 26225 HGNCID:696 Length:179 Species:Homo sapiens
Sequence 2:NP_001259087.1 Gene:Arf102F / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster


Alignment Length:177 Identity:81/177 - (45%)
Similarity:119/177 - (67%) Gaps:1/177 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGI-LFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLM 64
            ||: :.:.:.|||..::.::::||||.||||||||:..:.|:|.|.||||.|||.:...|..|.:
  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65

Human    65 WDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDV 129
            ||:|||:.:|..|..|:.||:.:|.||||.||:||:....||..||..::||.|.||:||||||:
  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130

Human   130 KECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176
            ...||.||::..|:|..:::..|.||:.||..|.||.:||:|:.:.|
  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAEL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARL5ANP_036229.1 Arl5_Arl8 3..175 CDD:133353 78/172 (45%)
Arf102FNP_001259087.1 YlqF_related_GTPase 1..180 CDD:424112 81/177 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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