DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FBXW2 and fbxw2

DIOPT Version :10

Sequence 1:NP_001362819.1 Gene:FBXW2 / 26190 HGNCID:13608 Length:486 Species:Homo sapiens
Sequence 2:NP_001018175.1 Gene:fbxw2 / 553942 ZFINID:ZDB-GENE-050522-303 Length:455 Species:Danio rerio


Alignment Length:455 Identity:361/455 - (79%)
Similarity:413/455 - (90%) Gaps:1/455 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    33 MERKDFETWLDNISVTFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLETLLKRDFLKLLPLELS 97
            ||:..||.||:::|.:||.|:|.|:|:|||||||||||.|||||||.||.|||||||:||||||:
Zfish     1 MEKVAFEGWLESVSTSFLVLSDQQRNQTLDHLISLSGAAQLRHLSNGLEALLKRDFLRLLPLELA 65

Human    98 FYLLKWLDPQTLLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDALHWKKVYLKAILRM 162
            ||||:|||||||||||||.|||||||:.||||||:.|::|||:||:|:|||.|||.:||||.|||
Zfish    66 FYLLRWLDPQTLLTCCLVCKQWNKVINGCTEVWQSVCRDLGWRIDESIQDARHWKVIYLKAKLRM 130

Human   163 KQLEDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAAVKFD 227
            |||.:.:|||||||||||||||||||:||||||||||||||||||.||||||||||||||.||||
Zfish   131 KQLREEDAFETSSLIGHSARVYALYYRDGLLCTGSDDLSAKLWDVRTGQCVYGIQTHTCATVKFD 195

Human   228 EQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFSVDYNDELDILVSGSADFTVKVWALSAGTC 292
            ||||||||||||:||||||:||:.|.||||||||||:|||||||.|||||||||||||:||||||
Zfish   196 EQKLVTGSFDNTIACWEWSTGAKIQQFRGHTGAVFSIDYNDELDTLVSGSADFTVKVWSLSAGTC 260

Human   293 LNTLTGHTEWVTKVVLQKCKVKSLLHSPGDYILLSADKYEIKIWPIGREINCKCLKTLSVSEDRS 357
            :|||||||||||||.|||.:|:|::||||||||||.||||||:||||||||||||:|||||||||
Zfish   261 VNTLTGHTEWVTKVHLQKSQVESMMHSPGDYILLSVDKYEIKVWPIGREINCKCLRTLSVSEDRS 325

Human   358 ICLQPRLHFDGKYIVCSSALGLYQWDFASYDILRVIK-TPEIANLALLGFGDIFALLFDNRYLYI 421
            :||||||.|||:||||.|.||:|||||||:|::|||| ..:.::|:||.||::|||||||.:||:
Zfish   326 VCLQPRLQFDGRYIVCCSDLGIYQWDFASFDVIRVIKPQQDPSSLSLLSFGEVFALLFDNHHLYV 390

Human   422 MDLRTESLISRWPLPEYRKSKRGSSFLAGEASWLNGLDGHNDTGLVFATSMPDHSIHLVLWKEHG 486
            :|||||..:.|||||.|||||||||||||..||||||||.||.||||||||||||||||||:|:|
Zfish   391 LDLRTEVTVGRWPLPAYRKSKRGSSFLAGVTSWLNGLDGKNDAGLVFATSMPDHSIHLVLWRENG 455

Human   487  486
            Zfish   456  455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXW2NP_001362819.1 F-box_FBXW2 87..126 CDD:438903 33/38 (87%)
WD40 172..479 CDD:238121 253/307 (82%)
WD40 repeat 183..217 CDD:293791 31/33 (94%)
WD40 repeat 220..255 CDD:293791 28/34 (82%)
WD40 repeat 261..297 CDD:293791 31/35 (89%)
WD40 repeat 313..351 CDD:293791 31/37 (84%)
WD40 repeat 359..394 CDD:293791 26/34 (76%)
WD40 repeat 409..449 CDD:293791 29/39 (74%)
WD40 repeat 455..477 CDD:293791 19/21 (90%)
fbxw2NP_001018175.1 F-box_FBXW2 55..94 CDD:438903 33/38 (87%)
F-box_SF <77..128 CDD:459239 37/50 (74%)
WD40 140..448 CDD:238121 253/307 (82%)
WD40 repeat 188..224 CDD:293791 29/35 (83%)
WD40 repeat 229..265 CDD:293791 31/35 (89%)
WD40 repeat 272..319 CDD:293791 37/46 (80%)

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