DRSC/TRiP Functional Genomics Resources

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Protein Alignment FBXW2 and Smu1

DIOPT Version :10

Sequence 1:NP_001362819.1 Gene:FBXW2 / 26190 HGNCID:13608 Length:486 Species:Homo sapiens
Sequence 2:NP_650766.1 Gene:Smu1 / 42272 FlyBaseID:FBgn0038666 Length:509 Species:Drosophila melanogaster


Alignment Length:325 Identity:70/325 - (21%)
Similarity:121/325 - (37%) Gaps:75/325 - (23%)


- Green bases have known domain annotations that are detailed below.


Human   128 EVWQTAC----KNLGWQIDDSVQDALHWKKVYLKAILRMKQLEDHEAFETSSLIGHSARVYALYY 188
            |||....    |:|.:|..|...       :..:|:|.:....|.|                   
  Fly   239 EVWNFTTGKVRKDLKYQAQDQFM-------MMEQAVLALNFSRDSE------------------- 277

Human   189 KDGLLCTGSDDLSAKLWDVSTGQCVYGIQ-TH----TCAAVKFDEQKLVTGSFDNTVACWEWSSG 248
               ::.:|:.|...|:|.:.||||:...: .|    ||.....|..::::.|||.||......||
  Fly   278 ---MVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKSG 339

Human   249 ARTQHFRGHTGAVFSVDYNDELDILVSGSADFTVKVWALSAGTCLNTL--TGHTEWVTKVVLQKC 311
            ...:.|:||:..|....:..:...::|.|:|.|||||:|....|:.|.  .|:...|..|::   
  Fly   340 KMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECVATYKPLGNELAVNTVLI--- 401

Human   312 KVKSLLHSPGDYILLSADKYEIKIWPIGREINCKCLKTLSVSEDR-------SICLQPRLHFDGK 369
                |..:|..:|:.:.....:.:...|:.:.       |.|..:       |..|.||    |:
  Fly   402 ----LPKNPEHFIVCNRSNTVVIMNMQGQIVR-------SFSSGKREGGAFISATLSPR----GE 451

Human   370 YIVCSSA-LGLYQWDFASYDILRVIKTPEIANLALLGFGDIFALLFDNRYLYIMDLRTESLISRW 433
            :|.|:.. ..||.:..:|..:.|.:...|         .|:..|........:.....:.|:..|
  Fly   452 FIYCAGEDQVLYCFSVSSGKLERTLNVHE---------KDVIGLTHHPHQNLLASYSEDGLLKLW 507

Human   434  433
              Fly   508  507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXW2NP_001362819.1 F-box_FBXW2 87..126 CDD:438903
WD40 172..479 CDD:238121 59/277 (21%)
WD40 repeat 183..217 CDD:293791 8/33 (24%)
WD40 repeat 220..255 CDD:293791 10/34 (29%)
WD40 repeat 261..297 CDD:293791 12/37 (32%)
WD40 repeat 313..351 CDD:293791 4/37 (11%)
WD40 repeat 359..394 CDD:293791 10/35 (29%)
WD40 repeat 409..449 CDD:293791 3/25 (12%)
WD40 repeat 455..477 CDD:293791
Smu1NP_650766.1 LisH_TPL 7..36 CDD:375350
CTLH 40..90 CDD:128914
WD40 <203..509 CDD:441893 70/325 (22%)
WD40 repeat 218..256 CDD:293791 5/16 (31%)
WD40 repeat 267..303 CDD:293791 11/57 (19%)
WD40 repeat 311..346 CDD:293791 10/34 (29%)
WD40 repeat 352..432 CDD:293791 20/93 (22%)
WD40 repeat 440..477 CDD:293791 11/40 (28%)
WD40 repeat 483..507 CDD:293791 2/23 (9%)
Blue background indicates that the domain is not in the aligned region.

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