DRSC/TRiP Functional Genomics Resources

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Protein Alignment GARS1 and gars1

DIOPT Version :10

Sequence 1:NP_002038.2 Gene:GARS1 / 2617 HGNCID:4162 Length:739 Species:Homo sapiens
Sequence 2:NP_001007492.1 Gene:gars1 / 493218 XenbaseID:XB-GENE-963079 Length:745 Species:Xenopus tropicalis


Alignment Length:189 Identity:34/189 - (17%)
Similarity:61/189 - (32%) Gaps:64/189 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    17 YFVTQEAPRRIFNMSRDTKLIVV------------VRNPVTRAISDYTQTLSK-KPDIPTFEGLS 68
            ||...:.|:.:..:..||.::.|            .:.|....:|    ||.| .|.:.:....:
 Frog   474 YFDLHDPPQDVVCIDLDTNMLYVSDEKKNMNWKQLPKKPCKNLLS----TLKKLYPQLSSVHQKT 534

Human    69 FRNRSLGL----VDVSWNAIRIGMYALHLESWLRYFPLAQIHFVSGERLITDPAGE--------- 120
            ....::.:    .|.||......:.....|::||:  :|.|  :.|.|....|..|         
 Frog   535 QEGSAIDMTPIEADFSWQKKMTQLEMEIQEAFLRF--MASI--LKGYRTYLRPITEAPSNKATAA 595

Human   121 -----------------------MGRIQDFLGIKRFITDKHFYFNKTKGF----PCLKK 152
                                   :.:.|.|:   |||.:..|..:|..|.    .|::|
 Frog   596 DSLFDRQGFLKSRDRAYAKFYTLLSKTQIFI---RFIEECSFVSDKDTGLAFFDDCIEK 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GARS1NP_002038.2 PLN02734 61..724 CDD:178335 22/132 (17%)
gars1NP_001007492.1 PLN02734 65..731 CDD:178335 34/189 (18%)

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