DRSC/TRiP Functional Genomics Resources

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Protein Alignment GARS1 and gars1

DIOPT Version :10

Sequence 1:NP_002038.2 Gene:GARS1 / 2617 HGNCID:4162 Length:739 Species:Homo sapiens
Sequence 2:NP_001373382.1 Gene:gars1 / 337230 ZFINID:ZDB-GENE-030131-9174 Length:749 Species:Danio rerio


Alignment Length:743 Identity:612/743 - (82%)
Similarity:663/743 - (89%) Gaps:24/743 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     4 PR----PVLLRGARAALLLLLPPRLLARPSLLLRRSLSAASCPPISLPA---AASRSSMDGAGAE 61
            ||    ||.|.|:.       |.|:|         ||||..|......|   .....:|||: .|
Zfish    24 PRVRTSPVHLCGSS-------PTRVL---------SLSAHLCKKKKRSAWLEMTEGQNMDGS-IE 71

Human    62 EVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVDRAKMED 126
            |:||||||||::||||||:||.:.||.|||.|||||||||||.||||||:||||||||||.||||
Zfish    72 EILAPLRLAVKEQGDLVRQLKAENAPDVDVSKAVAELKARKRFLEAKELSLQPKDDIVDRTKMED 136

Human   127 TLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKT 191
            |||||||||||||||||||||||||||||||||||:|.|||||||||||||||||||||||||||
Zfish   137 TLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQHFIQEEQILEIDCTMLTPEPVLKT 201

Human   192 SGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELAD 256
            |||||||||:||||||||||||||||||||||||||||||..|||:||::|:.|:|||.||||||
Zfish   202 SGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKCPAEKKAEMDNVITQMDNYTQQELAD 266

Human   257 LFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPF 321
            |||.||||||.|||||:||:||||||:|.|||||||.||||||||||||||||||||||||||||
Zfish   267 LFVQYNVKSPSTGNDLTPPISFNLMFQTSIGPGGNMQGYLRPETAQGIFLNFKRLLEFNQGKLPF 331

Human   322 AAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQS 386
            ||||||||||||||||||||||||||||||||||||:||.|.||.|||||.:.|||:|||.||||
Zfish   332 AAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPNEKVHFKFSNVADLDIMLYSSKAQTSGQS 396

Human   387 ARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKT 451
            |:.||||||||||||||:|||||||||||||.|||::.|||||||||:||||||||||||||:||
Zfish   397 AQIMRLGDAVEQGVINNSVLGYFIGRIYLYLVKVGVAKDKLRFRQHMDNEMAHYACDCWDAETKT 461

Human   452 SYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVM 516
            ||||||||||||||||||.||||||||||||||||||||.||||||||:|||||||||||||..|
Zfish   462 SYGWIEIVGCADRSCYDLLCHARATKVPLVAEKPLKEPKVVNVVQFEPNKGAIGKAYKKDAKFAM 526

Human   517 EYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGL 581
            |||||||||||||.|.||||.||||||||||||:|||||:|:|||||||:||||||||||||||:
Zfish   527 EYLAICDECYITEQEKLLNENGEFTIETEGKTFKLTKDMVNIKRFQKTLHVEEVVPNVIEPSFGI 591

Human   582 GRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHK 646
            |||||::|||||.:||||||||:|||||.|||:|||||||||||||||||:||||||||:|||||
Zfish   592 GRIMYSIFEHTFRIREGDEQRTYFSFPATVAPYKCSVLPLSQNQEFMPFVRELSEALTRNGVSHK 656

Human   647 VDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLAN 711
            |||||||||||||||||||||||:|||||||||.||||||||||||||||||:.|||.|::||||
Zfish   657 VDDSSGSIGRRYARTDEIGVAFGITIDFDTVNKNPHTATLRDRDSMRQIRAEVGELPEIIRDLAN 721

Human   712 GNITWADVEARYPLFEGQETGKKETIEE 739
            |.||||:||::||:||||||.||||:||
Zfish   722 GAITWAEVESKYPIFEGQETSKKETVEE 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GARS1NP_002038.2 PLN02734 61..724 CDD:178335 580/662 (88%)
gars1NP_001373382.1 PLN02734 66..734 CDD:178335 583/668 (87%)

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