DRSC/TRiP Functional Genomics Resources

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Protein Alignment meep and C8h11orf54

DIOPT Version :10

Sequence 1:NP_728575.2 Gene:meep / 261663 FlyBaseID:FBgn0063667 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001014228.1 Gene:C8h11orf54 / 363016 RGDID:1309534 Length:315 Species:Rattus norvegicus


Alignment Length:316 Identity:140/316 - (44%)
Similarity:189/316 - (59%) Gaps:13/316 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ERPLHVPPLSELKRVIQGALDENFRTVDVSVEACPDLRDSQFGLVERGLGGKATLLEAGGPPYLR 79
            |...|||.|.||..|:|..|.:||..|.|||..||||....|....:|:.|:..:.|.||.|||.
  Rat     5 EFSFHVPSLEELAEVLQKGLKDNFAHVQVSVVDCPDLTKEPFTFPVKGICGQTRIAEVGGVPYLL 69

  Fly    80 PLVQRDKLYNLKEITRRTQGAGKIFAVGPGAGPWPIRHSNCEGIFNF-----SLNEEDELTQGSY 139
            |||.:.|:|:|.||.:..:..| .|.:|.||||:.....|.|    |     :.:|..:...|||
  Rat    70 PLVNKKKVYDLNEIAKEIKLPG-AFILGAGAGPFQTLGFNSE----FMPIVQTASEHHQPVNGSY 129

  Fly   140 TATVRGANEDCVLERIPE--TESRAALILNLFLSEGKPGQVLRISAKQRTGGENFVECIRKGLER 202
            .|....|:..|:||:..:  .:...||:.|||.|||:||:|:.:.||:|||..|||.|:|:.||:
  Rat   130 FARANPADGKCLLEKYSQKYPDFGCALLANLFASEGQPGKVIEVQAKKRTGEHNFVSCMRQTLEK 194

  Fly   203 HYGDQVVGLGGMFVVRRGCVHQHVM-RDFSKTPIHTQEQIQNWLKFYEMPAQLNAVGTLVTKDMG 266
            ||||:.||:||.|:|::|.|..|:| .:||...:::.|.:..||.||||.|.|..:...|:||.|
  Rat   195 HYGDKPVGMGGTFLVQKGKVKAHIMPAEFSSCSLNSDEAVNQWLNFYEMKAPLVCLPVFVSKDPG 259

  Fly   267 LDLRLQHFHSFSFANWGGHYHYDTTPDIVEYEAYLNVAERVIRVDRPVATDQLGRD 322
            |||||:|.|.||....|||||||||||.|||..|.:.|:.:.|:|:|..|...|||
  Rat   260 LDLRLEHTHFFSHHGEGGHYHYDTTPDTVEYLGYFSPAQFLYRIDQPKETHAFGRD 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meepNP_728575.2 DUF1907 31..310 CDD:462636 125/286 (44%)
C8h11orf54NP_001014228.1 DUF1907 14..304 CDD:341210 129/294 (44%)

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