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Protein Alignment Rpb7 and AT4G14520
DIOPT Version :9
Sequence 1: | NP_731983.1 |
Gene: | Rpb7 / 261631 |
FlyBaseID: | FBgn0051155 |
Length: | 173 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001190729.1 |
Gene: | AT4G14520 / 827099 |
AraportID: | AT4G14520 |
Length: | 200 |
Species: | Arabidopsis thaliana |
Alignment Length: | 170 |
Identity: | 33/170 - (19%) |
Similarity: | 70/170 - (41%) |
Gaps: | 26/170 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFYHISLEQEILLHPRYFGPQ-----LLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQ 60
||..:.:.:::.:..::...| :|..:.|.|.. |..|. ::||.:.:|.:..||:....
plant 1 MFSEVEMARDVAICAKHLNGQSPHQPILCRLLQDLIH--EKACR-EHGFYLGITALKSIGNNKNN 62
Fly 61 PGQG-------FVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLS-CFIS------HH 111
.... .:.:||.:....|.|.:|::|...||::...|.|...|||. .::| :|
plant 63 NIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLRYAYLSLLKMPHYH 127
Fly 112 SIPADMQFCPNGNPPCYKSKDEDVVISGEDKIRLKIVGTR 151
.:.:.:. ....|.::..|...:..|. .:|.:::..|
plant 128 YVHSPLS---EDEKPHFQKDDLSKIAVGV-VVRFQVLAVR 163
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rpb7 | NP_731983.1 |
PTZ00162 |
1..173 |
CDD:240298 |
33/170 (19%) |
AT4G14520 | NP_001190729.1 |
RPB7 |
<77..182 |
CDD:224020 |
20/91 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1095 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1140388at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR12709 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 3.010 |
|
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