Protein Alignment Polr2G and Polr3h

DIOPT Version :10

• Sequence 1: NP_731983.1
• Gene: Polr2G / 261631
• FlyBaseID: FBgn0051155
• Length: 173
• Species: Drosophila melanogaster
• Sequence 2: NP_084505.2
• Gene: Polr3h / 78929
• MGIID: 1926179
• Length: 204
• Species: Mus musculus
• Alignment Length: 203
• Identity: 40/203 - (19%)
• Similarity: 81/203 - (39%)
• Gaps: 35/203 - (17%)

  Fly     1 MFYHISLEQEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQPGQGF 65
            ||..:.:...:.:.|..|..:|.:::.::|..::........|..|.:..|.::....:.||.|.
Mouse     1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGA 65

  Fly    66 VVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFCPNGNPPC--- 127
            ....|.::.:||.||..|:|...:|..:..|:...:|    |.....||.:....|......
Mouse    66 SHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLG----FFDDILIPPESLQQPAKFDEAEQV 126

  Fly   128 ----YKSKD--EDVVISGEDKIRLKIVG-TRVDA--TG-------------------IFAIGTLM 164
                |::::  .|:.:...::||.::|. :.||.  ||                   ...:|::.
Mouse   127 WVWEYETEEGAHDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEAPYTLVGSIS 191

  Fly   165 DDYLGLVS 172
            :..|||:|
Mouse   192 EPGLGLLS 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2G	NP_731983.1	PTZ00162	1..173	CDD:240298	40/203 (20%)
Polr3h	NP_084505.2	RNAP_III_Rpc25_N	2..81	CDD:239822	15/78 (19%)
		RNA_pol_Rbc25	83..201	CDD:400543	23/121 (19%)