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Protein Alignment Rpb7 and polr2g
DIOPT Version :9
Sequence 1: | NP_731983.1 |
Gene: | Rpb7 / 261631 |
FlyBaseID: | FBgn0051155 |
Length: | 173 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001017065.1 |
Gene: | polr2g / 549819 |
XenbaseID: | XB-GENE-1006751 |
Length: | 172 |
Species: | Xenopus tropicalis |
Alignment Length: | 172 |
Identity: | 141/172 - (81%) |
Similarity: | 157/172 - (91%) |
Gaps: | 0/172 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFYHISLEQEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQPGQGF 65
||||||||.|||||||||||.||.||||||::||||||||||||||||||||.||:||||||:||
Frog 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRGF 65
Fly 66 VVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFCPNGNPPCYKS 130
|:|||||||||||||||||:||||.|:||||:|.||||:|||||.||||::|:|.||.||||||:
Frog 66 VLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKT 130
Fly 131 KDEDVVISGEDKIRLKIVGTRVDATGIFAIGTLMDDYLGLVS 172
.||||||..:|:|||||||||||...|||||:||||||||||
Frog 131 VDEDVVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS 172
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
129 |
1.000 |
Domainoid score |
I5204 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H2019 |
Inparanoid |
1 |
1.050 |
290 |
1.000 |
Inparanoid score |
I2748 |
OMA |
1 |
1.010 |
- |
- |
|
QHG54448 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1140388at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0004872 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto105525 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR12709 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1187 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X3436 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
12 | 12.200 |
|
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