Protein Alignment Rpb7 and Polr3h

DIOPT Version :9

• Sequence 1: NP_731983.1
• Gene: Rpb7 / 261631
• FlyBaseID: FBgn0051155
• Length: 173
• Species: Drosophila melanogaster
• Sequence 2: NP_001120767.1
• Gene: Polr3h / 300088
• RGDID: 1305889
• Length: 204
• Species: Rattus norvegicus
• Alignment Length: 203
• Identity: 40/203 - (19%)
• Similarity: 81/203 - (39%)
• Gaps: 35/203 - (17%)

  Fly     1 MFYHISLEQEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQPGQGF 65
            ||..:.:...:.:.|..|..:|.:::.::|..::........|..|.:..|.::....:.||.|.
  Rat     1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGA 65

  Fly    66 VVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFCPNGNPPC--- 127
            ....|.::.:||.||..|:|...:|..:..|:...:|    |.....||.:....|......
  Rat    66 SHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLG----FFDDILIPPESLQQPAKFDEAEQV 126

  Fly   128 ----YKSKD--EDVVISGEDKIRLKIVG-TRVDA--TG-------------------IFAIGTLM 164
                |::::  .|:.:...::||.::|. :.||.  ||                   ...:|::.
  Rat   127 WVWEYETEEGAHDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEAPYTLVGSIS 191

  Fly   165 DDYLGLVS 172
            :..|||:|
  Rat   192 EPGLGLLS 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb7	NP_731983.1	PTZ00162	1..173	CDD:240298	40/203 (20%)
Polr3h	NP_001120767.1	RNAP_III_Rpc25_N	2..81	CDD:239822	15/78 (19%)
		RNA_pol_Rbc25	83..201	CDD:400543	23/121 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1095
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900