DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31495 and Nsf

DIOPT Version :10

Sequence 1:NP_731866.1 Gene:CG31495 / 261626 FlyBaseID:FBgn0051495 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_068516.2 Gene:Nsf / 60355 RGDID:621594 Length:744 Species:Rattus norvegicus


Alignment Length:360 Identity:127/360 - (35%)
Similarity:203/360 - (56%) Gaps:36/360 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VNITLPNTEERVNLLKSRINRL-GDITVAGDVCAREIAMKTKNFTEDELCQLVREALHEAIVRTH 65
            :.|.||:.:.|:.:|.....|: |...::.||..:|:|::||||:..||..|||.|...|:.| |
  Rat   393 MEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNR-H 456

  Fly    66 VTRCPK---------GLQVTQVDLLAAVK-IIQPRFG-RQEETLQLLM--------PYEYLDRTA 111
            :....|         .||||:.|.||::: .|:|.|| .||:....:|        |.    ...
  Rat   457 IKASTKVEVDMEKAESLQVTRGDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPV----TRV 517

  Fly   112 FDPNDLL-----STGRPRWSCHLVEGKPKSGLTTVAAQMALKTDCPFIKYISSAELLGLSDSEKC 171
            .|..:||     ::.|......|:||.|.||.|.:||::|.:::.||||..|..:::|.|::.||
  Rat   518 LDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKC 582

  Fly   172 QRIREVLEDAYVSRRSCVIIDDFERVIGYGALGKRYSKEFLQKLTVLLKKQPPNSHELIIICTSN 236
            |.::::.:|||.|:.|||::||.||::.|..:|.|:|...||.|.|||||.||...:|:||.|::
  Rat   583 QAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTS 647

  Fly   237 RLDVLEELGLLSVFTSVHNVPNVSTPKELMVIVEASKRFEPEELRQIEIAMDGRNVSIGIKRLLD 301
            |.|||:|:.:|:.|::..:|||::|.::|:..:|....|:.:|...|...:.|:.|.||||:||.
  Rat   648 RKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLM 712

  Fly   302 LIAWVNSLNPDRRAAKLLKKLGEAMGWVGNHSSPL 336
            ||.....::|:.|..|.|..:.|      ..:|||
  Rat   713 LIEMSLQMDPEYRVRKFLALMRE------EGASPL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31495NP_731866.1 SpoVK <1..88 CDD:440232 32/96 (33%)
AAA 129..257 CDD:459627 56/127 (44%)
NsfNP_068516.2 CDC48_N 6..83 CDD:215012
CDC48_2 111..183 CDD:215011
CDC48 159..>606 CDD:273521 73/217 (34%)
RecA-like_NSF-SEC18_r1-like 219..395 CDD:410912 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.

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