Protein Alignment CG31495 and nmd

DIOPT Version :10

• Sequence 1: NP_731866.1
• Gene: CG31495 / 261626
• FlyBaseID: FBgn0051495
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_609373.1
• Gene: nmd / 44021
• FlyBaseID: FBgn0005322
• Length: 369
• Species: Drosophila melanogaster
• Alignment Length: 333
• Identity: 61/333 - (18%)
• Similarity: 118/333 - (35%)
• Gaps: 109/333 - (32%)

  Fly    40 KTKNFTEDELCQLVRE----------ALHEAIVRTHVTRCPKGLQVTQVDLLAAVKIIQPRFGRQ 94
            |.|...|::|.:|..:          :.:|.::.:|:. .|..:.|:..|:.....:|      |
  Fly    50 KAKVLAEEQLKRLAEQEGFKLRGQEFSDYELMIASHLV-VPADITVSWADIAGLDSVI------Q 107

  Fly    95 EETLQLLMPYEYLDRTAFDPNDLLSTGRPRWSCH---LVEGKPKSGLTTVAAQMALKTDCPFIKY 156
            |....:::|.::.|  .|..:.|       |...   |:.|.|..|.|.:|...|.:....||
  Fly   108 ELRESVVLPIQHKD--LFKHSKL-------WQAPKGVLLHGPPGCGKTLIAKATAKEAGMRFI-- 161

  Fly   157 ISSAELLGLSD-----SEKCQRIREVLEDAYVSRRS----CVIIDDFERVIGYGALGKRYSKEFL 212
              :.::..|:|     |:|       |..|..|..|    |:|                    |:
  Fly   162 --NLDVAILTDKWYGESQK-------LTSAVFSLASRIEPCII--------------------FI 197

  Fly   213 QKLTVLLKKQPPNSHE-----------------------LIIICTSNRLDVLEELGLLSVFTSVH 254
            .::...|:.:..|.||                       :|::..:||...|::..:..:....|
  Fly   198 DEIDSFLRSRNMNDHEATAMMKTQFMMLWDGLSTNANSTVIVMGATNRPQDLDKAIVRRMPAQFH 262

  Fly   255 -NVPNVSTPKELMVIV----EASKRFEPEELRQIEIAMDG-------RNVSIGIKRLLDLIAWVN 307
             .:|:.:..|:::.::    |.|:..:...|.::.....|       ||.|:...|.|     :.
  Fly   263 IGLPSETQRKDILKLILQSEEVSQDVDLNRLSKLTNGFSGSDLREMCRNASVYRMRQL-----IT 322

  Fly   308 SLNPDRRA 315
            |.:|...|
  Fly   323 SRDPSATA 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG31495	NP_731866.1	SpoVK	<1..88	CDD:440232	10/57 (18%)
		AAA	129..257	CDD:459627	29/160 (18%)
nmd	NP_609373.1	RecA-like_ATAD1	98..263	CDD:410928	37/210 (18%)
		AAA_lid_3	287..323	CDD:465537	7/40 (18%)