DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31495 and Spast

DIOPT Version :10

Sequence 1:NP_731866.1 Gene:CG31495 / 261626 FlyBaseID:FBgn0051495 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_008762708.1 Gene:Spast / 362700 RGDID:1308494 Length:614 Species:Rattus norvegicus


Alignment Length:195 Identity:48/195 - (24%)
Similarity:82/195 - (42%) Gaps:21/195 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 LVEGKPKSGLTTVAAQMALKTDCPFIKYISSAELLGLSDSEKCQRIREVLEDAYVSRRSCVIIDD 193
            |:.|.|.:|.|.:|..:|.:::..|.. ||:|.|......|..:.:|.:...|...:.|.:.||:
  Rat   377 LLFGPPGNGKTMLAKAVAAESNATFFN-ISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDE 440

  Fly   194 F-----ERVIGYGALGKRYSKEFLQKLTVLLKKQPPNSHELIIICTSNRLDVLEELGLLSVFTSV 253
            .     ||..|.....:|...|||.:...:   |......::::..:||...|:|..|......|
  Rat   441 VDSLLCERREGEHDASRRLKTEFLIEFDGV---QSAGDDRVLVMGATNRPQELDEAVLRRFIKRV 502

  Fly   254 H-NVPNVSTPKELM--VIVEASKRFEPEELRQIEIAMDGRNVSIGIKRLLDLIAWVN--SLNPDR 313
            : ::||..|...|:  ::.:.......:||.|:....||.:.|       ||.|...  :|.|.|
  Rat   503 YVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGS-------DLTALAKDAALGPIR 560

  Fly   314  313
              Rat   561  560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31495NP_731866.1 SpoVK <1..88 CDD:440232
AAA 129..257 CDD:459627 32/133 (24%)
SpastXP_008762708.1 MIT_spastin 114..193 CDD:239142
RecA-like_spastin 341..504 CDD:410932 32/130 (25%)
AAA_lid_3 531..585 CDD:465537 12/37 (32%)
Vps4_C <578..610 CDD:462762
Blue background indicates that the domain is not in the aligned region.

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