DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant4 and GALNT4

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_003765.2 Gene:GALNT4 / 8693 HGNCID:4126 Length:578 Species:Homo sapiens


Alignment Length:566 Identity:199/566 - (35%)
Similarity:301/566 - (53%) Gaps:51/566 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 RSDKLQGFRLPEPKGERKDWHD--YAAMEADRKRSGFGEHGVAVKIE-NPDEKQLEKEHYEMNGF 146
            |:.:|...||.:.:...:|...  |....||.:  ..||.|.|.|:: |.||.:.::|..|....
Human    40 RARELGSRRLSDLQKNTEDLSRPLYKKPPADSR--ALGEWGKASKLQLNEDELKQQEELIERYAI 102

  Fly   147 NGLISDRISVNRSVPDLRLEACKTRKY-LAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELL 210
            |..:|||||::|.:.|.|:..||::|: ...||..|||..|:||.::||||:|:||:..:|..||
Human   103 NIYLSDRISLHRHIEDKRMYECKSQKFNYRTLPTTSVIIAFYNEAWSTLLRTIHSVLETSPAVLL 167

  Fly   211 KQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHI 275
            |:|:||||.|:...||..|:.|:..  ...|.::|..:|:||:.||:.||..|.|.|:.|.|.|.
Human   168 KEIILVDDLSDRVYLKTQLETYISN--LDRVRLIRTNKREGLVRARLIGATFATGDVLTFLDCHC 230

  Fly   276 EVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKMLYKQLPVLPEDAL 340
            |.|..||.||:|.|..:.....||::|||....|.::....:...|||||::.: |...:|:...
Human   231 ECNSGWLEPLLERIGRDETAVVCPVIDTIDWNTFEFYMQIGEPMIGGFDWRLTF-QWHSVPKQER 294

  Fly   341 DKSM----PYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSR 401
            |:.:    |.|||.|.|||||::..:|..||.||..:::||||..||||::|.|||.|...|||.
Human   295 DRRISRIDPIRSPTMAGGLFAVSKKYFQYLGTYDTGMEVWGGENLELSFRVWQCGGKLEIHPCSH 359

  Fly   402 VAHIFRGPMK-PRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDP----KTYDNLDAGDLTRQR 461
            |.|:|  |.: |...|   ||: :|..|.|||||||||::.|.|:|    :.|     ||::.::
Human   360 VGHVF--PKRAPYARP---NFL-QNTARAAEVWMDEYKEHFYNRNPPARKEAY-----GDISERK 413

  Fly   462 GVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNM---GKSTEEAVGM 523
            .:||||:||||.|::..|.|:..|   |.:.|.: .|.|::......|||..   ...|...:.:
Human   414 LLRERLRCKSFDWYLKNVFPNLHV---PEDRPGW-HGAIRSRGISSECLDYNSPDNNPTGANLSL 474

  Fly   524 FSCADNRTHPQ-PNQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQG----GNQFWY 583
            |.|     |.| .|||:|.:..:::|......:|.:|.|  ....|.|.:|...|    .|..|:
Human   475 FGC-----HGQGGNQFFEYTSNKEIRFNSVTELCAEVPE--QKNYVGMQNCPKDGFPVPANIIWH 532

  Fly   584 YDRQTQRLVHGENNKRCLEGF-VENGIAKVVANSCENGNDRQRWEF 628
            : ::...:.| .::..||..: ...|...|...:|:..:..|.|.|
Human   533 F-KEDGTIFH-PHSGLCLSAYRTPEGRPDVQMRTCDALDKNQIWSF 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 99/238 (42%)
pp-GalNAc-T 181..480 CDD:133004 129/307 (42%)
Ricin_B_lectin 496..626 CDD:279046 31/138 (22%)
RICIN 498..628 CDD:238092 32/138 (23%)
GALNT4NP_003765.2 Catalytic subdomain A 134..243 50/110 (45%)
pp-GalNAc-T 138..432 CDD:133004 129/307 (42%)
Catalytic subdomain B 303..365 34/63 (54%)
Ricin_B_lectin 446..574 CDD:395527 31/136 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.