DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and Galnt5

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_113984.1 Gene:Galnt5 / 83627 RGDID:620361 Length:930 Species:Rattus norvegicus


Alignment Length:541 Identity:195/541 - (36%)
Similarity:291/541 - (53%) Gaps:59/541 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 GEHGVAVKIENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIF 184
            |:.|..|.:. |.:|:..::.::...||..:||.|.|:|::.|.|...|..:.....||..|:|.
  Rat   429 GQFGRPVVVP-PGKKKEAEQRWKEGNFNVYLSDLIPVDRAIEDTRPAGCAEQLVHNDLPTTSIIM 492

  Fly   185 IFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPER 249
            .|.:|.::.||||::||:||:||.|:|:|:||||.|..|.||..||.|:.| ||. |.|:|..||
  Rat   493 CFVDEVWSALLRSVHSVLNRSPPHLIKEILLVDDFSTKDYLKANLDKYMSQ-FPK-VRILRLKER 555

  Fly   250 QGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSG 314
            .|||.||:|||:.|.|.|:.|.|||:|.|..||.||:|.:.:|.|...||:::.|:.:|.||.:.
  Rat   556 HGLIRARLAGAQNATGDVLTFLDSHVECNVGWLEPLLERVYLNRKKVACPVIEVINDKDMSYMTV 620

  Fly   315 NKDGARGGFDWKMLY--KQLP--VLPEDALDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDI 375
            : :..||.|.|.|.:  :.:|  |:.::.:.::...|.|||.||||:|:..:|::||.||..||:
  Rat   621 D-NFQRGVFTWPMNFGWRTIPPDVIAKNGIKETDIIRCPVMAGGLFSIDKSYFYELGTYDPGLDV 684

  Fly   376 WGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGH-NFVAKNHKRVAEVWMDEYKQ 439
            ||||..|||||:|||||.:..:|||||.||||.. .|...|:.. ..|.:|..||||||:||||:
  Rat   685 WGGENMELSFKVWMCGGEIEIIPCSRVGHIFRND-NPYSFPKDRMKTVERNLVRVAEVWLDEYKE 748

  Fly   440 YVYKRDPKTYD-NLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNV 503
            ..|.......| .||.|:||:||.:|::|||:||.|::..|.||  :|.|.|.    |:|:..|:
  Rat   749 LFYGHGDHLIDQGLDVGNLTQQRELRKKLKCQSFKWYLDNVFPD--LKAPVVR----ASGVFINL 807

  Fly   504 ANPVYCLDNMGKST---EEAVGMFSCADNRTHPQPNQFWELSIFRDLRMKGFDSVCLDVHEGPPN 565
            |        :||..   ...|.:..|..:....|.|..|       :|:......|  |...|..
  Rat   808 A--------LGKCVSIKNITVVLEDCDGSSELQQFNYTW-------VRLIKHGEWC--VAPIPDK 855

  Fly   566 ATVWMWSCHSQGGNQFWYYDRQTQRLVHGE----------NNKRCLEGFVENGIAKVVANSCENG 620
            .::.::.|.::.....|.:  ::....|.|          ....|:||.......|:.|  |...
  Rat   856 GSLTLYPCDNRNNRLKWLH--RSASAFHPELVDHIVFESYQQLLCMEGNFSQKTLKLAA--CNPT 916

  Fly   621 NDRQRWEFGFVNHTMLDTFYD 641
            ..:|:|:|        :.:||
  Rat   917 EPQQKWKF--------EKYYD 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 109/237 (46%)
pp-GalNAc-T 181..480 CDD:133004 142/304 (47%)
Ricin_B_lectin 496..626 CDD:279046 26/142 (18%)
RICIN 498..628 CDD:238092 26/142 (18%)
Galnt5NP_113984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..210
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..377
WcaA 484..>599 CDD:223539 60/116 (52%)
Catalytic subdomain A 485..594 59/110 (54%)
pp-GalNAc-T 489..790 CDD:133004 142/304 (47%)
Catalytic subdomain B 654..716 37/61 (61%)
RICIN 804..925 CDD:214672 26/149 (17%)
RICIN 810..924 CDD:238092 23/126 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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