DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant4 and Galnt14

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_082140.2 Gene:Galnt14 / 71685 MGIID:1918935 Length:550 Species:Mus musculus


Alignment Length:566 Identity:193/566 - (34%)
Similarity:290/566 - (51%) Gaps:69/566 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VDIPRSDKLQGFRLPEPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIENPDEKQLEKEHYEMNG 145
            :::|...::|     .||....||.|......:|            :..|..:.::..:.|::..
Mouse    31 LEVPLGPEVQ-----TPKPSDADWDDLWEQFDER------------RYLNAKKWRVGDDPYKLYA 78

  Fly   146 FNGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELL 210
            ||...|:|||.||:|||.|.:.|....|...||..|:|..|.||..:||||:|.||:||||..|:
Mouse    79 FNQRESERISSNRAVPDTRHKRCSLLVYCTDLPPTSIIITFHNEARSTLLRTIRSVLNRTPMHLI 143

  Fly   211 KQIVLVDDGSE-----WDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVF 270
            ::|:||||.|.     ..::|.|           .|..:||.|||||:.:|:.||.:|.|..:.|
Mouse   144 QEIILVDDFSNDPEDCKQLIKLP-----------KVKCLRNNERQGLVRSRMRGADIAQGTTLTF 197

  Fly   271 FDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKM--LYKQLP 333
            .|||.|||.:||.||:..:..:.....||::|.|:.:.|:|.....: .||||||.:  .::||.
Mouse   198 LDSHCEVNRDWLQPLLHRVKEDYTRVVCPVIDIINLDTFNYIESASE-LRGGFDWSLHFQWEQLS 261

  Fly   334 VLPEDA--LDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLD 396
             |.:.|  ||.:.|.|:|::.||||.|:..:|..||.||..:||||||.:|:||::|||||.|..
Mouse   262 -LEQKALRLDPTEPIRTPIIAGGLFVIDKAWFDYLGKYDVDMDIWGGENFEISFRVWMCGGGLEI 325

  Fly   397 VPCSRVAHIFRGP---MKPRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDAGDLT 458
            :|||||.|:||..   :.|.||.   |...||.||.|||||||||||.|...|...:. ..|::.
Mouse   326 IPCSRVGHVFRKKHPYVFPDGNA---NTYIKNTKRTAEVWMDEYKQYYYAARPFALER-PFGNIE 386

  Fly   459 RQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQ--NVANPVYCLDNMGKSTEEAV 521
            .:..:|:.|.|::|.|::..|.|:..|      ||..:   ||  |:.....||::..:..:|.:
Mouse   387 NRLNLRKNLHCQTFKWYLENVYPELRV------PPDSS---IQKGNIRQRQKCLESQKQKKQEIL 442

  Fly   522 GMFSCADNRTHPQPNQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDR 586
            .:..||..:.....:|.|..:..:.:..   :.:||.|....|.|.|.:..|.:....|.|  .:
Mouse   443 RLSPCAKVKGDGAKSQVWAFTYTQQIIQ---EELCLSVVTLFPGAPVVLALCKNGDERQLW--TK 502

  Fly   587 QTQRLVHGENNKRCLE-----GFVENGIAKVVANSCENGNDRQRWE 627
            ...|:.|..:: .||:     ...|:| .:||.|.||:....|.|:
Mouse   503 TGARIEHIASH-LCLDTDMFGDSTEDG-KEVVVNPCESSLMSQHWD 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 102/242 (42%)
pp-GalNAc-T 181..480 CDD:133004 130/310 (42%)
Ricin_B_lectin 496..626 CDD:279046 31/136 (23%)
RICIN 498..628 CDD:238092 32/137 (23%)
Galnt14NP_082140.2 Catalytic subdomain A 110..215 51/115 (44%)
Glyco_tranf_2_3 111..337 CDD:290369 103/238 (43%)
pp-GalNAc-T 114..408 CDD:133004 130/310 (42%)
Catalytic subdomain B 274..336 34/61 (56%)
RICIN 422..547 CDD:238092 30/132 (23%)
Ricin_B_lectin 422..545 CDD:279046 29/129 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.