DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and galntl6

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001139074.1 Gene:galntl6 / 568915 ZFINID:ZDB-GENE-090312-115 Length:600 Species:Danio rerio


Alignment Length:664 Identity:263/664 - (39%)
Similarity:367/664 - (55%) Gaps:100/664 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KRYVKRLLRKVVLLLVVIVTVSLV--TTLVVERRMKNAAELTEQLDPNGDPITPVFRAANIHPTR 67
            ||..||:|:...|.:|.::.:..|  .::..|:.:..:.|..||..|.|      ....:|:.. 
Zfish     2 KRRQKRVLQMAFLFMVALIFLPNVGLWSMYREKSLMKSHEPGEQGFPLG------LNDGHIYTW- 59

  Fly    68 KAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIENPD 132
                                 ..|.|       |:|||||.::..|.:|.|.||||....:.   
Zfish    60 ---------------------TDGLR-------RRDWHDYESIRKDGQRVGKGEHGKPYPLV--- 93

  Fly   133 EKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLRS 197
            |.:.:...|:.||||..:|:.|:::||:||:|...||.:.||..|||.|:|..|.||.:::|||:
Zfish    94 EDECDDSVYKENGFNIYVSNNIALDRSLPDIRHPNCKQKLYLENLPNTSIIIPFHNEGWSSLLRT 158

  Fly   198 IYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKV 262
            ::|:.||||..|:.:|:||||.|:.:.||..|.:|:.: ||. |.|||..:|:|||..|:.||.|
Zfish   159 LHSISNRTPDHLIAEIILVDDYSDREHLKAHLAEYMSR-FPK-VRIVRTKKREGLIRTRLLGASV 221

  Fly   263 AVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKM 327
            |.|:|:.|.|||.|.|.||||||::.||.|||...|||:|.|.|..|.|.:...|..||.|||:|
Zfish   222 ARGEVLTFLDSHCEANINWLPPLLDQIAQNPKTIVCPMIDVIDHNHFGYEAQAGDAMRGAFDWEM 286

  Fly   328 LYKQLPVLPE-DALDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCG 391
            .||::|:.|| ...|.|.||:||||.|||||:|..:||:|||||..|:||||||:|:|||:||||
Zfish   287 YYKRIPIPPELQGPDPSDPYQSPVMAGGLFAVNRQWFWELGGYDTGLEIWGGEQFEISFKVWMCG 351

  Fly   392 GMLLDVPCSRVAHIFRG--PMK-PRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLD 453
            |.:.|||||||.||:|.  |.| |.|..     :|:|.|||||.|||||.:|:|:|.|: |.:|.
Zfish   352 GSMYDVPCSRVGHIYRKYVPYKVPSGTS-----LARNLKRVAETWMDEYTEYIYQRRPE-YRHLS 410

  Fly   454 AGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGKSTE 518
            .||||.|:.:|:.||||.|.|:|..||.|....:|||||...|.|.|:|.|:.: |:|:...||.
Zfish   411 TGDLTAQKELRKHLKCKDFKWYMNTVAWDLPKYYPPVEPLPAAWGEIRNAASGL-CVDSKHGSTG 474

  Fly   519 EAVGMFSC---ADNRT--HPQPNQF-WELSIFRDLRMKG--------FDSVCLDVHEGPPNATVW 569
            ..:.:.:|   ...||  |.|...| |.    .|:|...        ||::       ..|:.:.
Zfish   475 TELRLDNCLKEGAERTWAHEQIFTFGWR----EDIRPGDPLHTRKFCFDAI-------SQNSPIT 528

  Fly   570 MWSCHSQGGNQFWYYDRQTQRLVH---------GENNKRCLEGFVENGIAKVVANSCENGNDRQR 625
            ::.||...|||.|.| |:.:.|.|         ..|:||            :..|.|:..::.|:
Zfish   529 LYDCHGMKGNQHWSY-RKDKSLYHLVSSGCMDCSPNDKR------------IFMNKCDPKSETQQ 580

  Fly   626 WEFGFVNHTMLDTF 639
            |.|..||.|:||.|
Zfish   581 WIFQKVNATVLDKF 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 127/234 (54%)
pp-GalNAc-T 181..480 CDD:133004 160/302 (53%)
Ricin_B_lectin 496..626 CDD:279046 37/152 (24%)
RICIN 498..628 CDD:238092 37/152 (24%)
galntl6NP_001139074.1 pp-GalNAc-T 142..437 CDD:133004 160/302 (53%)
Glyco_tranf_2_2 142..404 CDD:287123 144/268 (54%)
Ricin_B_lectin 453..581 CDD:279046 37/152 (24%)
RICIN 455..583 CDD:238092 37/152 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586984
Domainoid 1 1.000 211 1.000 Domainoid score I2739
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 506 1.000 Inparanoid score I1301
OMA 1 1.010 - - QHG48703
OrthoDB 1 1.010 - - D144590at33208
OrthoFinder 1 1.000 - - FOG0001284
OrthoInspector 1 1.000 - - mtm6424
orthoMCL 1 0.900 - - OOG6_104854
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2546
SonicParanoid 1 1.000 - - X1309
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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