DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and galnt12

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_688194.1 Gene:galnt12 / 559736 ZFINID:ZDB-GENE-060503-704 Length:578 Species:Danio rerio


Alignment Length:541 Identity:177/541 - (32%)
Similarity:277/541 - (51%) Gaps:63/541 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 SGFGEHGVAVKIE-NPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKY-LAKLPN 179
            :..||.|.|||:: :.:||:.|:|..:.:..|..:|||||::|.:.:.....|:..|| ...||.
Zfish    68 NALGEMGRAVKLDLSGEEKREEEESIKKHQINTYVSDRISLHRRLAERWNPLCRNLKYDYLSLPT 132

  Fly   180 ISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIV 244
            .||:..|:||.::||||:::||:..:|..||.:::||||.|:.:.||:||::|:..  ...|.::
Zfish   133 TSVVIAFYNEAWSTLLRTVHSVLETSPDLLLNEVILVDDYSDREHLKEPLENYIAD--LKKVRLI 195

  Fly   245 RNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDF 309
            |..:|:||:.||:.||.:|.|:|:.|.|.|.|.:..||.||::.|...|....||::|.|....|
Zfish   196 RARKREGLVRARLLGASIATGEVLTFLDCHCECHEGWLEPLLQRIKEEPSAVVCPVIDVIDWNTF 260

  Fly   310 SYFSGNKDGARGGFDWKMLYKQLPVLPEDALDKSMP---YRSPVMMGGLFAINTDFFWDLGGYDD 371
            .|.....:...|||||::::....:...:...:|..   .|||.|.|||||:|..:|..||.||.
Zfish   261 QYLGNPGEPQIGGFDWRLVFTWHSIPEHEQKRRSAATDVVRSPTMAGGLFAVNKKYFLYLGTYDT 325

  Fly   372 QLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGHNFVAKNHKRVAEVWMDE 436
            .:::||||..|.||:||.|||.|...|||.|.|:|     |:..|...|....|..|.||||||:
Zfish   326 GMEVWGGENLEFSFRIWQCGGSLEIHPCSHVGHVF-----PKKAPYSRNKALANSVRAAEVWMDD 385

  Fly   437 YKQYVYKRDPKTYDNLDA-GDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGII 500
            :|:..|.|.|  :..|:| ||:|.:|.:|.||:||.|.||:..:.||  ::.|..:|..:  |::
Zfish   386 FKEVYYHRSP--HARLEAYGDVTDRRKLRMRLRCKDFRWFLDNIYPD--IQVPEDKPGMF--GML 444

  Fly   501 QNVANPVYCLDNMGKSTEEAVG----MFSCADNRTHPQ-PNQFWELSIFRDLRMKGFD------- 553
            :|.....||.|.......:..|    ::.|     |.. .|||:|.|..:::|....|       
Zfish   445 KNKGMTNYCFDYNPPDEHKIAGHRVILYPC-----HGMGQNQFFEYSTLQEIRYNTRDPAGCVVA 504

  Fly   554 ---------SVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGENNKRCLEGF--VEN 607
                     ::|....|..|....:::              |:...|.|.:..| |:|..  .:.
Zfish   505 DPVSTFLTMNLCSKPREAVPEDQKFLF--------------REDGSLYHVQTQK-CVEAVDRTDA 554

  Fly   608 GIAKVVANSCENGNDRQRWEF 628
            |........|.: :|.|:|.|
Zfish   555 GSPGPALRPCSD-SDAQKWFF 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 93/237 (39%)
pp-GalNAc-T 181..480 CDD:133004 121/302 (40%)
Ricin_B_lectin 496..626 CDD:279046 28/152 (18%)
RICIN 498..628 CDD:238092 29/152 (19%)
galnt12XP_688194.1 pp-GalNAc-T 134..428 CDD:133004 121/302 (40%)
Ricin_B_lectin 440..572 CDD:279046 28/154 (18%)
RICIN 442..574 CDD:238092 29/152 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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