DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and galnt8b.1

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_021331085.1 Gene:galnt8b.1 / 559373 ZFINID:ZDB-GENE-041210-83 Length:629 Species:Danio rerio


Alignment Length:583 Identity:176/583 - (30%)
Similarity:275/583 - (47%) Gaps:129/583 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 DEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLR 196
            ||::..::.::..|:|..:|||:.::|.:||.|...|..|:|...||.:||:.|:.:|..:.:.|
Zfish    98 DEQRKAEDLFQKYGYNAFLSDRLPLDRELPDTRDHRCAEREYPPDLPTVSVVLIYLDEALSVIQR 162

  Fly   197 SIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYV----QQHFPHLVTIVRNPERQGLIGARI 257
            ::||:|||||..|||:|:||||.|..:.|:..|..|:    ::| |.||.:|.:.|::||..|||
Zfish   163 AVYSIINRTPAHLLKEIILVDDHSTNEDLQTQLHVYISSINEKH-PGLVKMVTHAEQKGLSQARI 226

  Fly   258 AGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDF---SYFSGNKDGA 319
            :|.|.|.|.|:...|:||||:..|..||:..|..:..:...|:.|.|:::|.   .||:     :
Zfish   227 SGWKAASGDVVAILDAHIEVHVKWAEPLLARIQADRTLVLSPVFDKINYDDLEVTKYFA-----S 286

  Fly   320 RGGFDWKM--LYKQLPVLPEDALDKSMPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYE 382
            ..||||.:  :|...|....:..|.|:|.:||.:| |:..::..||.::|..|:.:.::|||..|
Zfish   287 AHGFDWALWCMYVTFPKKWYNRNDPSLPGKSPSVM-GILVVDRLFFGEIGTLDEGMQVYGGENVE 350

  Fly   383 LSFK----------------------------------IWMCGGMLLDVPCSRVAHIFRGPMKPR 413
            |..:                                  :|:|||.:..||||::|||.|. .||.
Zfish   351 LGIRVIHHHTEAFIILLYLHVEQWCCCSLLTLGCVLAQVWLCGGSIEVVPCSKIAHIERA-HKPY 414

  Fly   414 GNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDN--LDAGDLTRQRGVRERLKCKSFHWFM 476
             .|...|.:.:|..|||||||||||:.||.......:|  :|.|||:.::.:||||.||.|.|::
Zfish   415 -MPDLSNVMKRNALRVAEVWMDEYKKNVYMAWGLPLENHGIDIGDLSERKKLRERLNCKPFKWYL 478

  Fly   477 ----TEVAP-DFLVKFPPVEPPSYAAGIIQNVANPVYCLDNMGKSTEEAVGMFSCADNRTHPQPN 536
                ||:.| |.|:.:          |.:.|......|||. |.|.|....::.|          
Zfish   479 ENVYTELNPMDDLLGY----------GALINDLQTSLCLDK-GPSEENTPILYPC---------- 522

  Fly   537 QFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQ-------GGNQF----W-------- 582
            .|....:|       |.:...::..||....:     ||:       |..:|    |        
Zfish   523 HFLTSQVF-------FYTTSGEILVGPLQPLL-----HSRNRCLADPGSGRFPEFSWCSDTEKPK 575

  Fly   583 --YYDRQTQRLVHGENNKRCLE------GFVENGIAKVVANSCENGNDRQRWEFGFVNHTMLD 637
              |:|.:..:.:...:.|||||      |..:|   .|....|.|    |.|.   :.|.:.|
Zfish   576 HMYWDFKQGQAIQNRDTKRCLEISPKQTGDYKN---NVFVQECRN----QHWR---IQHVIKD 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 89/276 (32%)
pp-GalNAc-T 181..480 CDD:133004 122/347 (35%)
Ricin_B_lectin 496..626 CDD:279046 32/156 (21%)
RICIN 498..628 CDD:238092 33/156 (21%)
galnt8b.1XP_021331085.1 pp-GalNAc-T 147..482 CDD:133004 120/343 (35%)
Ricin_B_lectin 494..620 CDD:306998 32/165 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I12264
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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