DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and galnt1

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_009290644.1 Gene:galnt1 / 559073 ZFINID:ZDB-GENE-030131-2360 Length:557 Species:Danio rerio


Alignment Length:521 Identity:213/521 - (40%)
Similarity:308/521 - (59%) Gaps:33/521 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 RKRSGFGEHGVAVKIENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKYLAKLP 178
            |...|.||.|..|.|.. |:::..||.:::|.||.:.|:.|::|||:||:|||.|||:.|...||
Zfish    51 RPHDGPGEMGKPVVIAK-DQQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDDLP 114

  Fly   179 NISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQ-HFPHLVT 242
            ..||:.:|.||.:.||||:::|||:|:|..||::||||||.||.|.||:.|:.||:: ..|  |.
Zfish   115 RTSVVIVFHNEAWTTLLRTVHSVIDRSPRHLLEEIVLVDDASERDFLKRQLEHYVRKLEVP--VR 177

  Fly   243 IVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHE 307
            :||..:|.|||.||:.||.::.|||:.|.|:|.|....||.||:..|.::.|...||::|.||.:
Zfish   178 VVRMEQRSGLIRARLKGASISTGQVITFLDAHCECTTGWLEPLLSRIKLDKKTVVCPIIDVISDD 242

  Fly   308 DFSYFSGNKDGARGGFDWKMLYKQLPVLPEDAL-----DKSMPYRSPVMMGGLFAINTDFFWDLG 367
            .|.|.:|: |...|||:||:.::..|| |:..:     |:::|.|:|.|.||||:|:.|:|.::|
Zfish   243 TFEYMAGS-DMTYGGFNWKLNFRWYPV-PQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIG 305

  Fly   368 GYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRG-HNFVAKNHKRVAE 431
            .||..:||||||..|:||:||.|||.|..|.||.|.|:|| ...|...|.| ...:.||::|:||
Zfish   306 TYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFR-KATPYTFPGGTGQIINKNNRRLAE 369

  Fly   432 VWMDEYKQYVYKRDPKTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYA 496
            |||||:|.:.|...|.. ..:|.||::.:..:|:||:||.|.|::..|.||     ..:....|:
Zfish   370 VWMDEFKNFFYIISPGV-TKVDYGDISTRTSLRQRLQCKPFSWYLENVYPD-----SQIPRHYYS 428

  Fly   497 AGIIQNVANPVYCLDNMGKSTEEAVGMFSCADNRTHPQ-PNQFWELSIFRDLRMKGFDSVCLDVH 560
            .|.|:||... .|||||.:...|.||:|:|     |.. .||.:..:..:::|.   |.:||||.
Zfish   429 LGEIRNVETN-QCLDNMARKENEKVGIFNC-----HGMGGNQVFSYTANKEIRT---DDLCLDVS 484

  Fly   561 EGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGENNKRCLEGFVENGIAKVVANSCENGNDRQR 625
            :  .|..|.|..||...|||.|.||.....||| .|:.:||:...|:.........| :|...|:
Zfish   485 K--LNGPVMMLKCHHLKGNQLWEYDPVKLSLVH-VNSNQCLDKASEDDSQVPSVRDC-SGARSQQ 545

  Fly   626 W 626
            |
Zfish   546 W 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 110/239 (46%)
pp-GalNAc-T 181..480 CDD:133004 135/305 (44%)
Ricin_B_lectin 496..626 CDD:279046 44/130 (34%)
RICIN 498..628 CDD:238092 45/130 (35%)
galnt1XP_009290644.1 pp-GalNAc-T 117..417 CDD:133004 135/305 (44%)
RICIN 430..548 CDD:238092 45/130 (35%)
Ricin_B_lectin 430..546 CDD:279046 44/128 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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