DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and galnt13

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_031748551.1 Gene:galnt13 / 550031 XenbaseID:XB-GENE-1012445 Length:571 Species:Xenopus tropicalis


Alignment Length:553 Identity:229/553 - (41%)
Similarity:326/553 - (58%) Gaps:42/553 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 ERKDWHDYAAMEA--DRKRSGFGEHGVAVKIENPDEKQLEKEHYEMNGFNGLISDRISVNRSVPD 162
            :|||.....|:.|  .|...|.||.|.||.|...|:::: ||.:::|.||.:.||.|::|||:||
 Frog    36 DRKDRSLLPALRAVISRTPEGPGELGKAVIIPKDDQEKM-KELFKINQFNLMASDLIALNRSLPD 99

  Fly   163 LRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQ 227
            :|||.|||:.|..:|||.|::.:|.||.::||||:::|||||:|..|:.:|:||||.||.|.||.
 Frog   100 VRLEGCKTKVYPDELPNTSIVIVFHNEAWSTLLRTVHSVINRSPHRLISEIILVDDSSERDFLKS 164

  Fly   228 PLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAIN 292
            ||::|| :|....|.|:|..:|.|||.||:.||.||.||::.|.|:|.|....||.||:..|..:
 Frog   165 PLENYV-KHLEVPVKILRMEQRSGLIRARLRGANVAKGQIITFLDAHCECTIGWLEPLLARIKED 228

  Fly   293 PKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKMLYKQLPVLPEDAL-----DKSMPYRSPVMM 352
            .|...||::|.||.:.|.|.:|: |...|||:||:.::..|| |:..:     |:::|.|:|.|.
 Frog   229 RKTVVCPIIDVISDDTFEYMAGS-DMTYGGFNWKLNFRWYPV-PQREMDRRKGDRTLPVRTPTMA 291

  Fly   353 GGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMK---PRG 414
            ||||:|:..:|.:||.||..:||||||..|:||:||.|||.|..|.||.|.|:||....   |.|
 Frog   292 GGLFSIDKTYFEELGTYDSGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPGG 356

  Fly   415 NPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEV 479
            .  || .:.||::|:||||||::|.:.|...|... .:|.||::.::.:||.|||..|.|::..|
 Frog   357 T--GH-VINKNNRRLAEVWMDDFKDFFYIISPGVV-KVDYGDVSERKALRENLKCNPFSWYLETV 417

  Fly   480 APDFLVKFPPVEPPSY-AAGIIQNVANPVYCLDNMGKSTEEAVGMFSCADNRTHPQ-PNQFWELS 542
            .||..:      |..| :.|.|:||... .||||||:...|.||:|:|     |.. .||.:..:
 Frog   418 YPDSQI------PRRYFSLGEIRNVETN-QCLDNMGRKENEKVGIFNC-----HGMGGNQVFSYT 470

  Fly   543 IFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGENNKRCLE-GFVE 606
            ..:::|.   |.:||||..  .|..|.|..||...|||.|.||.:|...:| ...:.||. ..||
 Frog   471 ADKEIRT---DDLCLDVSR--LNGPVIMLKCHHMRGNQLWEYDAETHTFLH-IITQSCLTLSNVE 529

  Fly   607 NGIAKVVANSCENGNDRQRWEFGFVNHTMLDTF 639
            :|........| ||.::|||...  |:|.|:.|
 Frog   530 DGTFGPTVEFC-NGRNQQRWTLR--NYTRLEVF 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 111/238 (47%)
pp-GalNAc-T 181..480 CDD:133004 135/306 (44%)
Ricin_B_lectin 496..626 CDD:279046 46/131 (35%)
RICIN 498..628 CDD:238092 48/131 (37%)
galnt13XP_031748551.1 pp-GalNAc-T 118..418 CDD:133004 135/306 (44%)
Ricin_B_lectin 431..548 CDD:395527 46/129 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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