DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant4 and poc1bl

DIOPT Version :9

Sequence 1:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001038243.2 Gene:poc1bl / 503760 ZFINID:ZDB-GENE-050306-41 Length:582 Species:Danio rerio


Alignment Length:588 Identity:202/588 - (34%)
Similarity:303/588 - (51%) Gaps:63/588 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 RKAPRPPFQDRNSVVDIPRSDKLQGFRLPEPKGERKDWHD-----YAAMEADRKRSGFGEHGVAV 126
            |.:| |...|.:...||...|      ||..:.|.:|..:     |..:..|....  ||:|.|.
Zfish    31 RSSP-PSLADNDGRRDILARD------LPPIEEEEEDSENLLRPVYEKLPPDSNAP--GEYGRAT 86

  Fly   127 KIE-NPDEKQLEKEHYEMNGFNGLISDRISVNRSVPDLRLEACKTRKY-LAKLPNISVIFIFFNE 189
            ::. ..:||:.|:...|....|..|||:||::|.:.|.|:..||.:|| :.:||..||:..|:||
Zfish    87 RLTLTSEEKKEEEASVERCAINIFISDKISLHRHIQDNRMHECKAKKYNIRRLPTTSVVIAFYNE 151

  Fly   190 HFNTLLRSIYSVINRTPPELLKQIVLVDDGSEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIG 254
            .::||||:|:||:..||..|||.|:||||.|:...||..|..|:..  ...|.::|..:|:||:.
Zfish   152 AWSTLLRTIHSVLETTPAVLLKDIILVDDFSDRGYLKSQLAQYISN--LERVRLIRTKKREGLVR 214

  Fly   255 ARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGA 319
            ||:.||..|.|.|:.|.|.|.|....|:.||:|.||.|.....||::|||....|.::...::..
Zfish   215 ARLIGATYATGSVLTFLDCHCECVPGWIEPLLERIAENETTIICPVIDTIDWNTFEFYMQTEEPM 279

  Fly   320 RGGFDWKMLYKQLPVLPEDALDKSM------PYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGG 378
            .|||||::.: |...:||  :|:.:      |.|||.|.|||||::..:|..||.||..:::|||
Zfish   280 VGGFDWRLTF-QWHAVPE--IDRKIRKSRIDPIRSPTMAGGLFAVSKAYFEYLGTYDMGMEVWGG 341

  Fly   379 EQYELSFKIWMCGGMLLDVPCSRVAHIFRGPMKPRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYK 443
            |..||||::|.|||.|...|||.|.|:|     |:..|...:...:|..|.||||||.|||:.|.
Zfish   342 ENLELSFRVWQCGGSLEIHPCSHVGHVF-----PKKAPYARSNFLQNTVRAAEVWMDTYKQHFYN 401

  Fly   444 RDP----KTYDNLDAGDLTRQRGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQNVA 504
            |:|    ::|     ||::.:..:|.||:||||.|::..|.|...|   |.:.|.: .|.:::..
Zfish   402 RNPPARKESY-----GDISERIVLRNRLQCKSFEWYLQNVYPGLHV---PEDRPGW-HGAVRSAG 457

  Fly   505 NPVYCLDNMG---KSTEEAVGMFSCADNRTHPQ-PNQFWELSIFRDLRMKGFDSVCLDVHEGPPN 565
            ....|||...   ..|...:.:|.|     |.| .||::|.:..|::|......:|.:|.:|..:
Zfish   458 IHSECLDYNAPDHNPTGAHLSLFGC-----HGQGGNQYFEYTSQREIRFNSVTELCAEVQDGMTH 517

  Fly   566 ATVWMWSCHSQG----GNQFWYYDRQTQRLVHGENNKRCLEGF-VENGIAKVVANSCENGNDRQR 625
              :.|..|...|    .:..|.: |:...:.|..:| .|:..: .|.|.|.:...||..|:..||
Zfish   518 --IGMKHCPQDGVPKPPSIIWQF-REDGSIFHPHSN-MCITSYRTEEGRADIQMRSCSTGDKHQR 578

  Fly   626 WEF 628
            |.|
Zfish   579 WSF 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 101/240 (42%)
pp-GalNAc-T 181..480 CDD:133004 126/308 (41%)
Ricin_B_lectin 496..626 CDD:279046 32/138 (23%)
RICIN 498..628 CDD:238092 34/138 (25%)
poc1blNP_001038243.2 WcaA 139..434 CDD:223539 128/309 (41%)
pp-GalNAc-T 143..437 CDD:133004 126/308 (41%)
RICIN 451..581 CDD:238092 34/138 (25%)
Ricin_B_lectin 451..579 CDD:279046 32/136 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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